Salmo salar (Atlantic salmon): 106571539
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Entry
106571539 CDS
T04363
Name
(RefSeq) DNA-binding protein RFX6-like
KO
K19521
regulatory factor X 6
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106571539
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Other basic domains
RF-X
106571539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
106571539
NCBI-ProteinID:
XP_014000172
UniProt:
A0ABM3CYM7
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All DBs
Position
ssa15:complement(33218937..33225870)
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AA seq
949 aa
AA seq
DB search
MKTICVHVLTHAFKCSISVILYLFCFTFYLIIFSLNMPMKRNTSPIRDGPFLHVHPPSTK
KFCDASEEFMHTALSDEKLPRDFHGHSLSKFDEEDDSGIKSEAEDTNETPSSEEDQDFVE
YSKDLPFKQTTPRKSITQIIKDKKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCR
KEKLDPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSAYYHLLYSGKGLT
RFSGSKLKNEGGYTRKYSLSSKTGTLLPEFPSVQHLVLQGSVSKEKVDTLIMMYKTHCQC
ILDNAINVNFEEIQNFLLHFWQGMPDHLLPLLDNSIIVDTFCVCDSILYKVLTDVLIPAT
MQEMPDSLLADIRNLAKHWEDWMVSSLENLPECLSEKKLPIARRFVSSLKRQTSFLHLAQ
IARPALFDQNVVNSMVVDIDQVDLNSIGSQALFTISSGDQDSDLYSEYDSITAFQELKDL
LKKNATVESFIEWLDTVVEQKVIKPGKQNGRSIKKRAQDFLLKWSFFGARVMHNLTLNNA
TSFGSFHLIRMLLDEYILLAIETQFNNDKEQDLQNLLDKYMRNADGSKAAFTASPSSCFL
ANRNKPSVVSSDLSVKNESLSEHTYMTLSANQQANMTVYQGSDTDGFSLSGQMDFSQNSG
PLMTPPISPAMVNRGSVINQVPMAVIPQSACTTIQPHISCQAFPDTMYQSLPSSSPSYYP
TTSNYQAVFRPQTHAQAPAYHTRSGSSHYPSFSEQHLAKDYFNSSCAVSPYSSRHTSNYS
TAPDPGMETQGVELLDSGGYNFVMSGLNSSGCQESAYSTAGQSGYYGNSGYLDSQRLGSM
IDQHVSVISSVSSIRSVPTYADVHDPLNILDDMGRKLAGPYYPESDSLGTPGAPPLPSSI
SAPCMYGGPAQFHSQDAPLPHRGPSEVRDMVSSLPPINTVFMGSSGGGP
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaatctgtgtacatgttcttacacatgcatttaaatgttccatttcagttatt
ttgtatttgttttgttttactttttacctcataatattttcattgaacatgcctatgaaa
cggaatacaagcccgatccgggatggcccatttcttcatgttcatccaccttcaaccaag
aaattctgcgatgcctctgaggagtttatgcacaccgctttatctgacgagaaattaccc
cgtgatttccatggacattcactctcaaagtttgacgaggaagatgattcgggaattaaa
tcagaagcagaagacactaatgaaaccccatcttctgaggaggaccaggattttgttgag
tattccaaagatttgcctttcaaacagactaccccgaggaaaagcatcactcagatcata
aaggacaagaagaaacagactcagctcacccttcaatggctggaggaaaactatattgtt
tgtgaaggggtttgtctgccacgttgcatcctgtacgctcactacctagacttctgtagg
aaggagaaactggatccagcctgtgctgctacatttggcaagacaattcgtcagaaattt
ccacttcttacaacaagaagacttgggacccgaggtcattcaaaatatcattattacggc
attggcatcaaagagagcagtgcctattatcacttgttgtactcagggaaaggcttgacg
agattttcagggagcaaactcaagaatgagggaggatatactcggaaatactccctcagc
tcaaaaacaggaactttgcttccagaattcccaagtgtacagcatctagtgcttcaaggt
tctgtctctaaagagaaggtggacacgctcatcatgatgtacaaaacacattgtcagtgc
atcctggacaatgccatcaatgtcaactttgaagagatacagaattttctgctgcatttc
tggcaaggaatgcccgaccaccttttaccactgctggataactccataatcgtggacacc
ttctgtgtgtgtgactctatactatataaggttctgacagatgtcctgatccctgctacg
atgcaggagatgcctgacagtctcctggcagacatccgtaacttagccaagcactgggaa
gactggatggtgtcttctctggaaaacctcccagaatgcctctcagagaagaagctcccg
attgcacgcagatttgtgtcctctctaaagcgtcagacctccttcttacaccttgcccag
atcgcgagaccagctctttttgaccagaatgtggtgaactccatggtggtggatatagat
caagtggatttgaacagcatagggtcacaagcccttttcaccatctcaagtggtgaccaa
gactctgacctctactctgaatatgactctataacagcgttccaagagctgaaagaccta
ctgaagaagaatgccactgtggaatcctttattgagtggctggacactgttgtggagcag
aaggtcattaagcctgggaagcagaacggacggtctataaagaagcgagctcaggacttc
ctcctcaagtggagtttctttggagcacgtgttatgcacaacctcacgttgaacaacgcc
accagttttggttcgttccacctaatccgcatgctgctggatgagtatatccttctggct
attgagacacaattcaacaatgacaaagaacaagacctccagaatctcctagataaatac
atgagaaatgcagatggcagcaaggcggcattcactgcctcccctagctcctgtttcctg
gccaaccgtaacaagcccagtgtggtgtccagtgatctgtctgtgaagaacgagtccctc
tcagaacacacatacatgaccctgtcagctaatcagcaggcaaacatgactgtctaccag
ggctctgatacagatggattctctctgtcaggacaaatggacttttcccagaacagtggc
cctctgatgacccctcccatctccccagccatggtgaacaggggcagtgtcatcaaccag
gtccccatggccgtcataccccagagcgcctgcaccaccatccagccccacatctcctgc
caagccttcccagacaccatgtaccagagcctgccttccagtagccccagctactacccc
accacttccaactaccaggctgtgttcagaccccagacacacgcccaggcccctgcctac
cacacccgctccggcagcagccactacccgtccttcagtgagcagcacctggccaaagac
tacttcaacagcagctgtgcagtgtccccctacagctccagacacacttccaattacagc
acagcccctgatcctgggatggagactcagggggttgagctactggactctggaggatac
aactttgtcatgagtgggttaaacagtagtggctgtcaggagtctgcctactcaacagca
ggacagagtgggtactatggaaacagtggctacctggatagccagaggctgggttccatg
atagaccagcatgtgtcagttatcagcagtgtgagcagtatccgttccgtcccaacgtac
gctgatgtacacgatcccctcaacatcctggatgacatgggcagaaagctggcaggccct
tactaccctgagtctgactcactgggcacacctggagctcctcccctcccctcctccatc
tccgcaccctgcatgtatggaggtcctgcccagttccactcccaggatgcaccgcttcct
caccggggaccatctgaggtgcgtgacatggtgtcatcgctgccacccatcaacactgtg
ttcatggggtctagtggaggaggaccgtga
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