Salmo salar (Atlantic salmon): 106572912
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Entry
106572912 CDS
T04363
Name
(RefSeq) laminin subunit alpha-5-like
KO
K06240
laminin, alpha 3/5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04382
Cornified envelope formation
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106572912
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106572912
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106572912
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
Laminin_I
EGF_LMN_ATRN
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
106572912
NCBI-ProteinID:
XP_014002972
LinkDB
All DBs
Position
ssa15:complement(99387324..99554602)
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AA seq
1854 aa
AA seq
DB search
MAKGPVLVTLSLTAGGPTRLVLLLLCPLICGLSAQGQELPTNRGNGYSLHPPYFNLAEGT
KVTATATCGEGDNGRSIHDLYCKLVGGPVSGDPSQTIQGQYCDTCAMGDSDRAHPITNAI
DGTERWWQSPPLSRSTEFNEVNVTLDLGQLFHVAYVLIKFANSPRPDLWVLERSTDFGET
YQPWQFFASSKRDCTERFGQRSIERINSDNDVICTTEYSRIVPLENGEVVVSLVNGRPGA
MNFSYSPVLRDFTKATNIRLRFLRTNTLLGHLMGKALRDPTVTRRYYYSIKDISIGGRCV
CNGHAEACDPHDPNDPYKLQCDCQHNTCGRSCDQCCPGFNQLPWKPATIYKANECEPCNC
NQHSFGCYYDPDVDQRRASVNIQGEYRGGGVCMECQHHTAGVNCERCILTYYRSPDHPLD
SPLACSPCVCQSEFTDGTCEDLTGRCYCKPNYTGENCDSCAEEYINFPDCYSIATYLNNN
NSNREAKPDGEIINCECSAAGTEGNSCHPDLRTRTCICKPGFTGEHCDVCAPGYYGLNCQ
ACQCSGTGCQGGRCDTLTGQCQCRQGFQGYSCDQCTPGYFNYPLCQLCGCSSVGTLPEGC
DVSGRCLCRPEFQGPRCEQCRSGFHSYPNCQVCTCDPRTSLGSSCSVSGHCHCRPNYSGT
ICDQCAPGFYGFPSCTPCQCSAEGSRFTSCDQVSGQCTCLPSVVGQRCDTCNSGTYGFPL
CQADTCNPDGSVQNEVLPTVGSCECLLYVEGVACDRCKPLFWNLSPDTVYGCSNCECNVE
GTMGGVAECAQSNGQCHCKPNACGGTCSVCKDGFFNLRSDSFFGCQGCQCDIGGSAGQSC
GERNGRCRCRPNVEGPKCNRPRPDHYFPDLHHLKFEIEDGTTLDGRPVRFGYNPMEFERF
SWRGYAQMSLIQSKVVVQVSVNSPDLFQIVLHYVNHGGLDMMGRVSILEDGNNSTCGNCS
EQSKQIVFAPSSEPTFVNVPQNNFVEPFVLNPGTWTVIIEAEGILLDYLVLLPSAYYEAP
ILQIKVTEPCSYRPAPDTSHNCLLYNYLSLDGFPSVSGNDASCRFDNHLPRPCHQERVTP
RHPNMAVCSGSNLNVQMHGRVPRPGDYVLVVEYASEEEAPQTISVSVNTPGGRTHQHHVT
LLHCKYSFLCRMVTIDEMNRVAVFTLPTDAEVQLIADRASFFLHKVYLVPREKFTMEYLA
PKVHCISPDSSSCIASRFQTPSDSLVLKEGQGLLGQQPVLASPDDPPLEPARARPPTAAD
NVDHFRLDNSQNAAVYSARVHTLGRYVFILHYHQPLHPTYPVQVFINGGRIWQGHANASF
CPHGYGCRSVLISENQIILDVTDNEIFLTVQVPDGKTLWLDYVLVVPESRYSSSYLSEQP
LDKSYDFISNCGQNSFYINPATASPFCRSSAISLSAFFNNGAMPCGCHEVGADSDTCEPF
GGQCQCRPNVIGRDCSQCTTGYWGFPNCRCESLHRAWLNFSQNCQHNRAGEHCEKCQGGF
HGNNSLDGQTLSCDTFNYSKTSVVATANKANTLEDSGTNTHQRAQDLLSHIKSIMREVKD
LTLQAKRTGLSETEVEQEEEDFSEKIQQVEAMLREMRFKSCVGQKKIAHRELSEAEKLLE
KVKDQLVSRVVEKEGLVKNIRERLGKIHDQLMDLREVLNQAVNNTALASDSNAVNEKKLE
DCQQQVDELNVKNKEVEDLLQVTEDDVTTVNDMLSMLHDSKEDYERLAAQLDGSRMPLAE
KVQKFSPSVSKIPLVEAAEKHAELLNELAMNLSSVISNTNKDGFIQRAVSASRVYSDIVD
AVRAAEIAANRAAMDSLANVQDQDLGQIANGLRKHSIELVNQAVKLQEDVSNGE
NT seq
5563 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagggaccggtgttggtgactctgtccctgacggctggcggccctacgcggctt
gttttgctgctgttatgtccgctaatctgcggcctctcggcgcagggccaggagctacca
actaaccgggggaatggctacagcctgcacccaccttattttaacctagcagaagggacc
aaagtcacggcgacagcgacctgcggagaaggggacaatgggcggtcgatacatgacttg
tactgcaagctggtcggagggccagtgtcaggggacccgagtcaaaccatccagggtcag
tactgtgatacctgcgccatgggggatagtgacagagcccaccccatcaccaatgccatc
gatggtacagagagatggtggcagagtcctcctctctcccgcagcacagagtttaatgag
gtcaacgttaccctggacctgggacagctcttccacgtggcctatgtcctgatcaagttt
gccaactctcctcgaccagacctctgggtgctagaacgttccaccgactttggagagacc
taccagccgtggcagttcttcgcctcttctaagagagactgcactgagcgcttcggacag
cgaagcatcgaacggatcaactccgacaacgacgtcatctgtaccactgaatactcccgc
atcgtacccctggagaatggagaggtggtggtgtctctagtgaacgggcgtcccggggcg
atgaacttctcctactccccagtcctgagggatttcaccaaggccaccaacatccgcctc
cgcttcctcagaaccaacacacttctgggacacctgatgggcaaggccctccgcgacccc
actgtcacacgcaggtattactacagtattaaggacatcagtattggaggacgctgtgtg
tgtaacggacacgctgaggcctgcgacccacacgaccccaacgacccttacaaactgcag
tgtgattgccagcacaacacttgtgggaggtcatgtgaccagtgttgccccggattcaac
cagctaccatggaaaccagcgaccatttacaaggctaacgagtgtgaaccgtgtaactgt
aaccaacactcgtttggctgttactacgaccccgatgtagaccagaggagagctagcgtc
aacatccagggagagtacaggggcggtggagtctgcatggagtgtcagcatcacaccgct
ggtgtcaactgtgagcgctgtatcctcacctactacagatcacctgaccatcccctggac
tccccattggcctgctccccctgtgtgtgccagtcagagttcacagatggtacctgtgag
gatctgacgggtcgttgttactgtaaacccaactacaccggagagaactgtgactcctgt
gcggaggaatacattaacttcccagactgctactccatagcaacctacctcaacaacaac
aatagcaacagagaagctaaacctgacggagaaatcatcaactgtgagtgcagtgctgcg
ggtacggaggggaactcctgccatccagacctgcgtacccgtacctgtatctgtaaacct
ggcttcactggggaacactgtgacgtctgtgcaccagggtactacggactcaactgccag
gcgtgtcagtgctcaggcacagggtgccagggtggtaggtgtgatacactgacggggcag
tgccagtgtcgccaaggcttccaggggtactcatgtgaccagtgtactccaggctacttc
aactaccccctctgccaactgtgtggctgtagcagcgtgggaactctcccagagggctgt
gatgtgtctggacggtgtctgtgtcgtccagagttccaggggccgcgatgtgagcagtgt
agatcaggcttccactcctaccccaactgccaagtgtgcacctgtgatcctcgcacctcg
ttgggctctagctgcagcgtgtcaggccactgccactgcagacctaactacagcggcacc
atctgtgaccagtgtgctcctggtttctacggcttccccagctgcacgccttgtcagtgc
tcagctgagggctccaggttcactagctgtgaccaggtgagtggtcagtgtacctgtctg
cccagcgtcgtgggacagaggtgtgacacctgcaactctggaacctacggattccctctc
tgccaagctgatacatgtaacccagacggttctgtacagaacgaggtcctgccaaccgtt
ggctcctgtgagtgtcttctctatgtggagggagtggcctgtgacaggtgtaaacctctg
ttctggaacctgtcacctgacaccgtctatggatgctccaactgtgaatgcaacgttgaa
gggacaatgggtggtgtggcagagtgtgctcagagtaacggccagtgtcactgtaagccc
aacgcgtgcggtggcacctgctctgtgtgtaaagatggattcttcaacctgcggagcgac
agcttcttcggctgtcaaggttgtcagtgtgatattggaggatcagcgggtcagtcctgt
ggggagaggaacgggagatgtcgctgcagacccaacgtagagggacccaagtgtaacagg
cctcgtccggaccactactttccagacctgcaccacctgaagtttgagatagaggatggt
accacgctggacgggcggcctgtgcgtttcggctataaccccatggaatttgaacggttc
agctggagagggtacgctcagatgtccctaatacagtccaaggtggtggttcaagtctcg
gttaactctccagacctgtttcaaatagtcttgcactatgtgaaccacggtggcctggac
atgatgggcagggtgtccatcctggaagatgggaacaactccacgtgtggcaactgctca
gaacagtccaaacagattgtgtttgcccccagctcagaacctacttttgtcaatgtgccc
cagaataactttgtagaaccattcgttcttaaccctggtacctggaccgtgatcatcgaa
gctgagggcatactgctggactacctggttctcctgcccagtgcctactatgaagctccc
atcctccagatcaaagtgactgagccatgctcctacaggcctgcaccggacaccagccac
aactgtttgctctacaattatctgtctctggatgggttcccctccgtctctggtaacgat
gccagctgcaggttcgacaaccacctgcccagaccctgccaccaggagagggtcacccct
cgccaccccaacatggccgtctgcagcggcagcaatctaaatgtccagatgcatggccgt
gtgcctcgtcccggggactatgttctggtggtagaatacgccagtgaggaggaagcacca
cagaccatctctgtgtccgtcaacacacctggcggaaggacacaccagcaccacgtcaca
ctgctgcactgcaaatacagtttcctgtgtcggatggtaaccatcgatgagatgaatcgc
gtggctgtctttactctccctactgatgctgaggtccagctgatagctgacagagccagc
ttcttcctgcacaaagtgtacctggttccccgggagaagttcactatggaatacctggcg
cctaaggtccactgtatctcacctgacagttcatcctgtatcgcgtcgaggttccagacc
ccgtctgattcgctggtgttgaaggaaggtcaagggttattgggccagcagcctgtcctg
gcctcccctgatgacccccccctagagccggcaagagcccgtcctcccaccgctgcggat
aacgtggaccacttccgccttgataacagccagaatgcagcagtgtactctgcccgtgtc
cacactctgggtcgctacgttttcatcctccactaccaccagcccctccaccccacctac
cctgtccaggtgttcatcaacgggggacgcatctggcagggccatgccaacgcctccttc
tgtccccatggttatggttgccgtagcgttctgatctccgagaaccagatcattctggac
gtgacggacaacgagatattcctgactgtccaagtccctgatggcaaaacactctggctg
gactatgttctggtggtgccagagagcaggtacagctccagttacctgtctgaacaacct
ctggacaaatcatatgacttcatcagcaactgtggacagaacagcttctacatcaatcct
gccacagcctctccattctgtcgtagttcagccatctctctctctgcgttcttcaacaac
ggtgccatgccctgcggttgccatgaggtgggcgcggacagcgatacctgcgaacccttc
ggcgggcagtgccagtgcagacctaacgtcatcggcagggactgctcacagtgtaccacg
ggctactggggattccccaactgtagatgtgagtcactacacagggcctggctgaatttc
tctcagaactgtcaacacaacagggctggagagcactgtgagaaatgtcaaggtggtttc
catggtaacaactctctagatggacaaaccctctcctgtgacacattcaactactccaaa
actagtgtggtggcgacagcaaacaaagcaaacactctggaggacagcggcactaacacc
catcagagagcccaggacctgctctcacacatcaagagcatcatgagagaggtgaaagac
ctcacgctgcaggcaaaacgtacgggtctgagtgagacagaagtggagcaggaggaggaa
gacttctctgagaagatacaacaggtggaggccatgctgagagagatgagattcaagagc
tgtgtcggccagaagaagatagcccacagagagctgtccgaggctgagaaactgctggag
aaggtgaaagaccagctggtgagtcgtgtggtggagaaggagggcttggtgaagaacatc
agggagcgtctggggaagatccatgaccaactgatggatctgagggaagttctgaaccag
gcggttaacaacacggccctcgcctccgattctaacgctgttaatgagaagaagctggag
gactgccagcaacaagtggatgagctgaatgtgaagaacaaggaggtggaggatctccta
caggtgacagaggatgacgtgaccactgtcaatgacatgctgtctatgctgcacgactcc
aaggaggactatgagcgtctggcagcccagttggatggttccaggatgcccttggcagag
aaggtgcagaagttttccccctccgtcagtaagataccgttggtggaggcagcagagaaa
catgctgaactactcaatgagctggccatgaacctctccagtgtgatctccaacaccaac
aaggatggtttcatccagcgagcagtgagcgcgtcccgggtgtactccgacatcgtcgac
gccgtcagagccgctgagattgctgccaaccgggctgctatggactcactggcgaatgta
caggatcaggacctgggccagatagctaacggtttgaggaaacacagtattgaactggtg
aaccaggctgtcaaactacaggaagatgtcagtaatggtgaga
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integrated database retrieval system