KEGG   Salmo salar (Atlantic salmon): 106572912
Entry
106572912         CDS       T04363                                 
Name
(RefSeq) laminin subunit alpha-5-like
  KO
K06240  laminin, alpha 3/5
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04382  Cornified envelope formation
sasa04510  Focal adhesion
sasa04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106572912
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106572912
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    106572912
SSDB
Motif
Pfam: EGF_laminin Laminin_N Laminin_I EGF_LMN_ATRN Tropomyosin
Other DBs
NCBI-GeneID: 106572912
NCBI-ProteinID: XP_014002972
LinkDB
Position
ssa15:complement(99387324..99554602)
AA seq 1854 aa
MAKGPVLVTLSLTAGGPTRLVLLLLCPLICGLSAQGQELPTNRGNGYSLHPPYFNLAEGT
KVTATATCGEGDNGRSIHDLYCKLVGGPVSGDPSQTIQGQYCDTCAMGDSDRAHPITNAI
DGTERWWQSPPLSRSTEFNEVNVTLDLGQLFHVAYVLIKFANSPRPDLWVLERSTDFGET
YQPWQFFASSKRDCTERFGQRSIERINSDNDVICTTEYSRIVPLENGEVVVSLVNGRPGA
MNFSYSPVLRDFTKATNIRLRFLRTNTLLGHLMGKALRDPTVTRRYYYSIKDISIGGRCV
CNGHAEACDPHDPNDPYKLQCDCQHNTCGRSCDQCCPGFNQLPWKPATIYKANECEPCNC
NQHSFGCYYDPDVDQRRASVNIQGEYRGGGVCMECQHHTAGVNCERCILTYYRSPDHPLD
SPLACSPCVCQSEFTDGTCEDLTGRCYCKPNYTGENCDSCAEEYINFPDCYSIATYLNNN
NSNREAKPDGEIINCECSAAGTEGNSCHPDLRTRTCICKPGFTGEHCDVCAPGYYGLNCQ
ACQCSGTGCQGGRCDTLTGQCQCRQGFQGYSCDQCTPGYFNYPLCQLCGCSSVGTLPEGC
DVSGRCLCRPEFQGPRCEQCRSGFHSYPNCQVCTCDPRTSLGSSCSVSGHCHCRPNYSGT
ICDQCAPGFYGFPSCTPCQCSAEGSRFTSCDQVSGQCTCLPSVVGQRCDTCNSGTYGFPL
CQADTCNPDGSVQNEVLPTVGSCECLLYVEGVACDRCKPLFWNLSPDTVYGCSNCECNVE
GTMGGVAECAQSNGQCHCKPNACGGTCSVCKDGFFNLRSDSFFGCQGCQCDIGGSAGQSC
GERNGRCRCRPNVEGPKCNRPRPDHYFPDLHHLKFEIEDGTTLDGRPVRFGYNPMEFERF
SWRGYAQMSLIQSKVVVQVSVNSPDLFQIVLHYVNHGGLDMMGRVSILEDGNNSTCGNCS
EQSKQIVFAPSSEPTFVNVPQNNFVEPFVLNPGTWTVIIEAEGILLDYLVLLPSAYYEAP
ILQIKVTEPCSYRPAPDTSHNCLLYNYLSLDGFPSVSGNDASCRFDNHLPRPCHQERVTP
RHPNMAVCSGSNLNVQMHGRVPRPGDYVLVVEYASEEEAPQTISVSVNTPGGRTHQHHVT
LLHCKYSFLCRMVTIDEMNRVAVFTLPTDAEVQLIADRASFFLHKVYLVPREKFTMEYLA
PKVHCISPDSSSCIASRFQTPSDSLVLKEGQGLLGQQPVLASPDDPPLEPARARPPTAAD
NVDHFRLDNSQNAAVYSARVHTLGRYVFILHYHQPLHPTYPVQVFINGGRIWQGHANASF
CPHGYGCRSVLISENQIILDVTDNEIFLTVQVPDGKTLWLDYVLVVPESRYSSSYLSEQP
LDKSYDFISNCGQNSFYINPATASPFCRSSAISLSAFFNNGAMPCGCHEVGADSDTCEPF
GGQCQCRPNVIGRDCSQCTTGYWGFPNCRCESLHRAWLNFSQNCQHNRAGEHCEKCQGGF
HGNNSLDGQTLSCDTFNYSKTSVVATANKANTLEDSGTNTHQRAQDLLSHIKSIMREVKD
LTLQAKRTGLSETEVEQEEEDFSEKIQQVEAMLREMRFKSCVGQKKIAHRELSEAEKLLE
KVKDQLVSRVVEKEGLVKNIRERLGKIHDQLMDLREVLNQAVNNTALASDSNAVNEKKLE
DCQQQVDELNVKNKEVEDLLQVTEDDVTTVNDMLSMLHDSKEDYERLAAQLDGSRMPLAE
KVQKFSPSVSKIPLVEAAEKHAELLNELAMNLSSVISNTNKDGFIQRAVSASRVYSDIVD
AVRAAEIAANRAAMDSLANVQDQDLGQIANGLRKHSIELVNQAVKLQEDVSNGE
NT seq 5563 nt   +upstreamnt  +downstreamnt
atggcgaagggaccggtgttggtgactctgtccctgacggctggcggccctacgcggctt
gttttgctgctgttatgtccgctaatctgcggcctctcggcgcagggccaggagctacca
actaaccgggggaatggctacagcctgcacccaccttattttaacctagcagaagggacc
aaagtcacggcgacagcgacctgcggagaaggggacaatgggcggtcgatacatgacttg
tactgcaagctggtcggagggccagtgtcaggggacccgagtcaaaccatccagggtcag
tactgtgatacctgcgccatgggggatagtgacagagcccaccccatcaccaatgccatc
gatggtacagagagatggtggcagagtcctcctctctcccgcagcacagagtttaatgag
gtcaacgttaccctggacctgggacagctcttccacgtggcctatgtcctgatcaagttt
gccaactctcctcgaccagacctctgggtgctagaacgttccaccgactttggagagacc
taccagccgtggcagttcttcgcctcttctaagagagactgcactgagcgcttcggacag
cgaagcatcgaacggatcaactccgacaacgacgtcatctgtaccactgaatactcccgc
atcgtacccctggagaatggagaggtggtggtgtctctagtgaacgggcgtcccggggcg
atgaacttctcctactccccagtcctgagggatttcaccaaggccaccaacatccgcctc
cgcttcctcagaaccaacacacttctgggacacctgatgggcaaggccctccgcgacccc
actgtcacacgcaggtattactacagtattaaggacatcagtattggaggacgctgtgtg
tgtaacggacacgctgaggcctgcgacccacacgaccccaacgacccttacaaactgcag
tgtgattgccagcacaacacttgtgggaggtcatgtgaccagtgttgccccggattcaac
cagctaccatggaaaccagcgaccatttacaaggctaacgagtgtgaaccgtgtaactgt
aaccaacactcgtttggctgttactacgaccccgatgtagaccagaggagagctagcgtc
aacatccagggagagtacaggggcggtggagtctgcatggagtgtcagcatcacaccgct
ggtgtcaactgtgagcgctgtatcctcacctactacagatcacctgaccatcccctggac
tccccattggcctgctccccctgtgtgtgccagtcagagttcacagatggtacctgtgag
gatctgacgggtcgttgttactgtaaacccaactacaccggagagaactgtgactcctgt
gcggaggaatacattaacttcccagactgctactccatagcaacctacctcaacaacaac
aatagcaacagagaagctaaacctgacggagaaatcatcaactgtgagtgcagtgctgcg
ggtacggaggggaactcctgccatccagacctgcgtacccgtacctgtatctgtaaacct
ggcttcactggggaacactgtgacgtctgtgcaccagggtactacggactcaactgccag
gcgtgtcagtgctcaggcacagggtgccagggtggtaggtgtgatacactgacggggcag
tgccagtgtcgccaaggcttccaggggtactcatgtgaccagtgtactccaggctacttc
aactaccccctctgccaactgtgtggctgtagcagcgtgggaactctcccagagggctgt
gatgtgtctggacggtgtctgtgtcgtccagagttccaggggccgcgatgtgagcagtgt
agatcaggcttccactcctaccccaactgccaagtgtgcacctgtgatcctcgcacctcg
ttgggctctagctgcagcgtgtcaggccactgccactgcagacctaactacagcggcacc
atctgtgaccagtgtgctcctggtttctacggcttccccagctgcacgccttgtcagtgc
tcagctgagggctccaggttcactagctgtgaccaggtgagtggtcagtgtacctgtctg
cccagcgtcgtgggacagaggtgtgacacctgcaactctggaacctacggattccctctc
tgccaagctgatacatgtaacccagacggttctgtacagaacgaggtcctgccaaccgtt
ggctcctgtgagtgtcttctctatgtggagggagtggcctgtgacaggtgtaaacctctg
ttctggaacctgtcacctgacaccgtctatggatgctccaactgtgaatgcaacgttgaa
gggacaatgggtggtgtggcagagtgtgctcagagtaacggccagtgtcactgtaagccc
aacgcgtgcggtggcacctgctctgtgtgtaaagatggattcttcaacctgcggagcgac
agcttcttcggctgtcaaggttgtcagtgtgatattggaggatcagcgggtcagtcctgt
ggggagaggaacgggagatgtcgctgcagacccaacgtagagggacccaagtgtaacagg
cctcgtccggaccactactttccagacctgcaccacctgaagtttgagatagaggatggt
accacgctggacgggcggcctgtgcgtttcggctataaccccatggaatttgaacggttc
agctggagagggtacgctcagatgtccctaatacagtccaaggtggtggttcaagtctcg
gttaactctccagacctgtttcaaatagtcttgcactatgtgaaccacggtggcctggac
atgatgggcagggtgtccatcctggaagatgggaacaactccacgtgtggcaactgctca
gaacagtccaaacagattgtgtttgcccccagctcagaacctacttttgtcaatgtgccc
cagaataactttgtagaaccattcgttcttaaccctggtacctggaccgtgatcatcgaa
gctgagggcatactgctggactacctggttctcctgcccagtgcctactatgaagctccc
atcctccagatcaaagtgactgagccatgctcctacaggcctgcaccggacaccagccac
aactgtttgctctacaattatctgtctctggatgggttcccctccgtctctggtaacgat
gccagctgcaggttcgacaaccacctgcccagaccctgccaccaggagagggtcacccct
cgccaccccaacatggccgtctgcagcggcagcaatctaaatgtccagatgcatggccgt
gtgcctcgtcccggggactatgttctggtggtagaatacgccagtgaggaggaagcacca
cagaccatctctgtgtccgtcaacacacctggcggaaggacacaccagcaccacgtcaca
ctgctgcactgcaaatacagtttcctgtgtcggatggtaaccatcgatgagatgaatcgc
gtggctgtctttactctccctactgatgctgaggtccagctgatagctgacagagccagc
ttcttcctgcacaaagtgtacctggttccccgggagaagttcactatggaatacctggcg
cctaaggtccactgtatctcacctgacagttcatcctgtatcgcgtcgaggttccagacc
ccgtctgattcgctggtgttgaaggaaggtcaagggttattgggccagcagcctgtcctg
gcctcccctgatgacccccccctagagccggcaagagcccgtcctcccaccgctgcggat
aacgtggaccacttccgccttgataacagccagaatgcagcagtgtactctgcccgtgtc
cacactctgggtcgctacgttttcatcctccactaccaccagcccctccaccccacctac
cctgtccaggtgttcatcaacgggggacgcatctggcagggccatgccaacgcctccttc
tgtccccatggttatggttgccgtagcgttctgatctccgagaaccagatcattctggac
gtgacggacaacgagatattcctgactgtccaagtccctgatggcaaaacactctggctg
gactatgttctggtggtgccagagagcaggtacagctccagttacctgtctgaacaacct
ctggacaaatcatatgacttcatcagcaactgtggacagaacagcttctacatcaatcct
gccacagcctctccattctgtcgtagttcagccatctctctctctgcgttcttcaacaac
ggtgccatgccctgcggttgccatgaggtgggcgcggacagcgatacctgcgaacccttc
ggcgggcagtgccagtgcagacctaacgtcatcggcagggactgctcacagtgtaccacg
ggctactggggattccccaactgtagatgtgagtcactacacagggcctggctgaatttc
tctcagaactgtcaacacaacagggctggagagcactgtgagaaatgtcaaggtggtttc
catggtaacaactctctagatggacaaaccctctcctgtgacacattcaactactccaaa
actagtgtggtggcgacagcaaacaaagcaaacactctggaggacagcggcactaacacc
catcagagagcccaggacctgctctcacacatcaagagcatcatgagagaggtgaaagac
ctcacgctgcaggcaaaacgtacgggtctgagtgagacagaagtggagcaggaggaggaa
gacttctctgagaagatacaacaggtggaggccatgctgagagagatgagattcaagagc
tgtgtcggccagaagaagatagcccacagagagctgtccgaggctgagaaactgctggag
aaggtgaaagaccagctggtgagtcgtgtggtggagaaggagggcttggtgaagaacatc
agggagcgtctggggaagatccatgaccaactgatggatctgagggaagttctgaaccag
gcggttaacaacacggccctcgcctccgattctaacgctgttaatgagaagaagctggag
gactgccagcaacaagtggatgagctgaatgtgaagaacaaggaggtggaggatctccta
caggtgacagaggatgacgtgaccactgtcaatgacatgctgtctatgctgcacgactcc
aaggaggactatgagcgtctggcagcccagttggatggttccaggatgcccttggcagag
aaggtgcagaagttttccccctccgtcagtaagataccgttggtggaggcagcagagaaa
catgctgaactactcaatgagctggccatgaacctctccagtgtgatctccaacaccaac
aaggatggtttcatccagcgagcagtgagcgcgtcccgggtgtactccgacatcgtcgac
gccgtcagagccgctgagattgctgccaaccgggctgctatggactcactggcgaatgta
caggatcaggacctgggccagatagctaacggtttgaggaaacacagtattgaactggtg
aaccaggctgtcaaactacaggaagatgtcagtaatggtgaga

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