Salmo salar (Atlantic salmon): 106573206
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Entry
106573206 CDS
T04363
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
106573206
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106573206
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106573206
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
106573206
NCBI-ProteinID:
XP_014003501
UniProt:
A0A1S3MKZ3
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Position
ssa16:12426613..12454773
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AA seq
1330 aa
AA seq
DB search
MFNWVVKVVPQPPDAPGSLGQETANPAPASPQKVSKDEVKKEVNAKPAKQQEEDISEDNG
IQSQSGVMTWLSNGFTSALPQPTGTPNLSRSNSVSRSLQEVQREDERNGVIKWIAEGLSK
VVPQPDDKYREDIREEEEEETETHEEYIAEPCVYNMKDVPDAEPLPHIPVVEIFSDDEEE
ERVPQFPLKVVNWIKNVIPQPVMLPAGYVEAQSKAQSKRSSLDKVLSPPPESLKGDEDSQ
NSNVVGWFVTGLGLKMPQPVARSRDDIEVVQNVSKQPKAVDLVLEEVVEADLKDLNQEVP
SKAMQSEPPQPFKPAQTTQPTQTTQSQPAQPKQPVKPEEPEQTLPNVPESTTPSLEDAET
QTGRWTPFIESIKREAEGVAMATMEERMTQERVDLVRMAEEVARHTAETAIRQMQEAQSI
KLSIHSQEALLEEDEDPELHMLREEESEVEHTKNKMTECQVCPAREEPVDAAKSDSASPD
VEPEPQEELESQSASPSPPPSPEPDPVKTAEPEPKPKAQDAKVAPEPVTQQPQKAEDGTA
PDTTTKEEGETAEEGGCGASSRLSVHPAVNVEDVDSGGGGHHRHIRQILTPQDPNLKTLT
VPRVSKACRQSKVADKEKNLHSQSEDDDEEETETAVRAWPSQSSILSGDDGLKERPASSA
SQASYVVNERLQELVKMFKERTERAKEKLIDPDDSDDDSPTASPARAPTPPAPPEEPEEE
AQPASPDREMEERQPQSRLCCKVTPPRWIRALLHYRFPASIDPFTNLVYVLWLFVVTLAW
NWNVWLIPMRWAFPYQTPSNIYLWLLADYLCDLIYILDIMVFQPRLQFVRGGDIVFDKKD
MRKNYMKTFRFKMDVISLVPLELFYFKTGINPLLRFPRLLKVMSFFEFNDRLEAILTKAY
VYRVIRTTSYLLYCLHCNACLFYWISAYEGLGSTKWVYDGKGNSYIRCYYFAVKTLITIG
GLPEPTTLFEIIFQLINYFVGVFAFSIMIGQMRDVVGAATSGQTYYRACMDNTVKYMASY
RIPKDVQNRVKTWYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYDIVSKVSLFQGCD
RQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVFVTLKSGSV
FGEISLLAVGGGNRRTANVVAHGFANLFILDKKDLNEILVHYPESQKLLRKKARNMLTKD
KKPQEPPKEPAQVIRPRTETPKLLKAALEMAHQKTGLKGTLAKIKENTNISSISLQPSMS
SSLTPLSPVSPVSSLDPERKSGIMSPTSDSSTLLRPASHCHRCETLSKEQDNVAEEEAGE
SVKRKEKRKP
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggttcctcagcctcctgacgcccctggctctctggga
caggagacagccaatcccgcacctgcatcaccacaaaaagtgtctaaagatgaagtcaaa
aaagaagtcaatgcaaaaccagccaaacagcaggaagaggatatttcagaggacaatggt
attcagagtcagagtggagtgatgacctggctctccaatggcttcaccagtgctctgcct
caaccaacaggcacccctaacctcagcagatccaactctgtatccaggtcactgcaggag
gtacaaagagaggacgaaaggaatggggtgattaagtggattgcagagggactgagcaaa
gtggtgcctcagccggatgacaagtacagagaggatattcgagaggaggaggaggaggag
acagagacgcacgaagagtatatcgcagagccatgtgtttataacatgaaagatgtgcca
gacgcagagcccctcccacacatacctgtggtggagatcttttcagacgatgaggaagag
gaacgggtaccacagttccccctcaaagtggttaactggattaagaatgttattcctcag
cctgtgatgctccctgcaggttatgtagaggcccagagtaaggcccagagcaagaggtca
tctcttgacaaagttttgtcgccacctcctgagtctctcaaaggtgacgaggactcacaa
aactccaatgtcgtgggctggtttgtgacgggcctcggcctcaagatgccacagcctgtc
gcgagatcaagagatgacattgaagttgtgcagaatgtctctaaacaacccaaagcagtg
gacctggttctggaggaagtagtagaagcagacttgaaggatctgaatcaggaagtgcca
tccaaggctatgcagtcagaaccaccacagccttttaagcccgcacagacgacacagcca
acacagacgactcagtcacagccggcacagccaaaacaaccagtgaaaccagaagagcct
gaacagactcttccaaatgtgccagagtctacaacaccatcactggaggatgcggagact
cagacgggcaggtggactcccttcatagagagcatcaagagagaggctgagggcgtagct
atggctaccatggaggaacggatgacccaggagcgcgtggatttggtgcgaatggcggag
gaggtggccagacacacagctgagacggccatcaggcagatgcaagaggcacaatcaatc
aagctttccattcacagccaggaagcccttctggaagaagacgaggacccagagttacac
atgctacgggaggaggagagtgaggtggagcacactaagaataagatgacagagtgtcag
gtgtgtcctgctagggaggagccagtggatgcagcaaaaagtgactctgcatcacccgac
gttgaaccagagccccaggaagagctagagtcccagagtgcctctccatcccctcctccc
agcccagaaccagatccagtcaagacagcagagcctgaacctaaaccaaaggcccaggat
gccaaagtagcacctgaaccggtgacccaacaaccacagaaagcagaggacggaaccgca
cctgacaccactaccaaggaggagggggagactgcagaggagggtggctgtggtgcgagc
tccaggctcagtgtgcaccctgctgtcaatgtggaggacgtggattcaggcggaggaggg
caccatcgacacattcgccaaatcctcaccccccaggaccccaacctcaagaccctgacc
gtacccagagtgtccaaagcctgccgccagagcaaagttgctgataaagaaaagaacctg
cactctcagagtgaggatgatgatgaagaggagactgagaccgcagtgagggcgtggcct
agccagtccagcatcctcagcggagacgatgggctaaaggaacggcctgcgtcgtccgct
agccaggccagctacgtggtgaacgagcgcctacaggagctggtcaagatgtttaaggag
aggacagagagggccaaagaaaaactcatagacccagatgactctgatgatgacagtccc
actgcctcccctgcgagagctccaacacctcctgcgcctccagaggagccggaggaggaa
gcacaaccagcctcccctgacagggagatggaggagcggcaaccccagtctagactgtgc
tgcaaggtgacgcctcctcgctggatcagagccctgcttcactaccgcttccccgctagc
atcgaccccttcaccaatctggtctatgtgctgtggctatttgtcgtcaccttggcgtgg
aactggaacgtgtggctgatcccaatgcgctgggccttcccctaccagacccctagtaac
atctacctgtggctgctagccgactacctgtgtgacctcatctacatcctggacatcatg
gtcttccagccccgcctgcagtttgtccgcggtggcgacatagtgtttgacaaaaaggac
atgcgaaagaattacatgaaaactttccggttcaagatggatgtcatcagtcttgtgcca
ctggaattgttctattttaaaactgggatcaacccactcctccgcttcccacggctacta
aaggtaatgtctttcttcgagttcaacgaccgtcttgaggccatcctgaccaaagcctac
gtttacagagtgatccggaccaccagctacctgctgtactgcctccactgtaatgcctgt
ctgttctactggatctctgcgtatgaaggtctgggctccacgaagtgggtctatgatgga
aagggcaacagttacatccgctgctactactttgctgtgaagactctgatcaccattggt
ggactgccggagcccacaacgctctttgaaatcatctttcagctcatcaactactttgta
ggagtgtttgccttttccatcatgataggacagatgagagatgtggtcggtgcagccact
tcaggacagacgtactacagagcatgcatggacaacactgtcaaatacatggcctcctac
cgtatccccaaagacgtgcaaaaccgggtcaaaacctggtacaactacacctggcagtcc
cagggcatgctggatgaacaggagcttctggtccagctcccagacaagatgaggctggac
atcgctgtggatgtcaactatgacattgtcagtaaagtctctctcttccagggttgcgac
agacagatgatctttgacatgttaaagagtctgaggtctgttgtttacctcccgggggac
tatgtctgcaaaaagggtgaggttggacgggagatgtacattatcaaggccggggaggtg
caggtggtgggcgggccagacgggaagaccgtgtttgtcacactgaagtcggggtcagtg
tttggggaaatcagcttgcttgcagtgggtggaggaaacagaagaacagccaacgtagtg
gctcatggcttcgccaacctgttcatcctggacaagaaggacctcaatgaaattttagtg
cattaccccgagtctcagaagctgctccgcaagaaggccaggaatatgctgacaaaagac
aagaagcctcaggagcctccgaaggagccggcccaggtgatccgtcctcggacagagaca
cccaagctactcaaagctgctctggagatggctcatcagaaaacaggcctcaaagggacc
cttgcaaagattaaggagaacaccaacatatccagtatttctctacagccctcaatgtcc
tcctccctgacccccctgtccccagtatctccggtctccagtctggacccagagcgcaag
tctggcatcatgtccccaacctcagacagctccacgttgctccgccctgcctcccattgt
cacagatgtgagacgctgtccaaggagcaggacaacgtggcggaagaagaggcaggagag
agtgtgaagaggaaagaaaagagaaagccatga
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