Salmo salar (Atlantic salmon): 106579291
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Entry
106579291 CDS
T04363
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa02010
ABC transporters
sasa04145
Phagosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106579291
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106579291
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106579291
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
106579291
Enzymes [BR:
sasa01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
106579291
Transporters [BR:
sasa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
106579291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
RsgA_GTPase
AAA_30
AAA_16
Rad17
AAA_29
KIF21A_4th
Lectin_N
DUF3450
Motif
Other DBs
NCBI-GeneID:
106579291
NCBI-ProteinID:
XP_014014551
UniProt:
A0A1S3NGH3
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All DBs
Position
ssa19:complement(51232531..51243313)
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AA seq
713 aa
AA seq
DB search
MARLKTYGLVLLYDLVLWGALWTGLVLLEFSSSGGLVGLWAFGALRWALHHSITLVLSDR
KPQPVLRRWVAVLCLLPPVFESGRMVMVPASTADDLGLVPGPSMVVLALVSSTVACLAWE
LGFPDDGGNQGKEKKKKQEARAQLMRVVRYCKPDALYLAAAFLFLSLAVICETFIPYYQG
KVIDTLRGQYQHNSFMYAIGGMGLVSLGSALCSGLRGGLFMCSLSRLNKRMRHMLFRNLV
QQDIPFFEENKPGSLVSRLGYDVDKMGRSVALNSNVLVRSLVKTAGMLVLMLGLSWQLTL
LTMVEMPLLTLLQTKYNTYNQEFTKQLQDCQAQIKELASQAIGAVRTVRSFRAEEKELDR
YNQALERMYKVQEHKGIISAVHLLLRRMVTVGLKVAMLFLCRRLISAGQLSIGSVLAFVL
FQKDMVTNMKHLVYVFGDMLCTVGAAAKVFTFLDRKSDQKEAGELAPAKLQGKLAFHNVS
FYYPSRPNTPALKAVSLELHPGKMTALVGPSGGGKSSCVSLLARLYEPKEGQVLLDGQPL
HCYQHQYLHQKMALVSQEPVLFSGSIRHNIEYGLVGCTLEKVKEAAKSANVHDFICTLEQ
GYDTDVGECGGQLSSGQKQCIAIARALVREPQVLILDEATSGMDINTQHVVQGVLAGSVG
QTVLVVAHRLQTVEKADQIIFMEGGEVVEQGTHQELMASKGRYHRLKEELFED
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttaaaaacatatgggctggtccttctctatgacctagtgctgtggggggca
ctgtggactgggttagtgctacttgagttctccagtagtggaggactggtggggttatgg
gcctttggagccctaaggtgggcattgcaccactcaatcaccctggtgctttctgataga
aagccacagcccgtgctgaggagatgggtggcagtgctctgcctcttgcctcctgtgttt
gaaagtggacgtatggtcatggtgccggcatcgactgccgacgacctgggtctggtgcct
ggcccaagcatggtggtcttggccctggtatcctccactgtggcctgcctggcatgggag
ctgggcttccctgatgatggagggaaccaagggaaggagaagaagaagaaacaggaggcc
agggcacagttgatgagggtggtgcgatactgcaaaccagacgccctctacctggctgca
gccttcctcttcctcagcctggctgtcatctgtgagacgtttatcccttactaccaggga
aaggtcattgatacgctgaggggtcagtaccagcacaacagcttcatgtacgccattgga
ggcatgggactcgtctcactaggaagtgctctgtgctcaggcctgcgagggggcttgttc
atgtgtagcctgtccagactcaacaagaggatgagacacatgctgttccgcaacctggta
caacaggacatacccttctttgaggagaacaaaccaggaagccttgtctcccgcctcggc
tatgatgtggacaagatgggacgctctgtggctctgaacagtaatgtgctggtgcgcagc
ctggtgaagacggctggtatgctagtcctgatgctgggcctgtcctggcagctcaccctg
ctcaccatggtggagatgcccctcctcaccctgctgcagaccaaatataacacatacaac
caggagttcactaagcagctgcaggactgccaggcccagatcaaggagctggcatcccag
gccattggggcggtgagaacggttcgcagcttcagagctgaggagaaggagctagatagg
tacaaccaagcgctggagaggatgtacaaggtccaggagcacaagggcatcatcagtgcc
gtccaccttttactgagaaggatggtgacagtgggcctaaaggtggccatgctgttcctg
tgtcggaggctcatctcggctggccagctgagcattggcagtgtgctggctttcgtcctc
ttccagaaagacatggtgaccaatatgaagcatcttgtttatgtctttggagacatgctg
tgcactgtcggggcggcagccaaggtgttcacgtttctggacagaaagtcagatcagaaa
gaagcaggagagctggctcctgcaaagcttcaggggaaacttgctttccacaatgtcagc
ttctactatccctcacgcccaaatacacccgcactgaaggctgtgagtttggaactgcat
ccggggaagatgacagcgctggtggggccctctggtggcgggaagagctcctgcgtcagc
ctgctggcgaggttgtatgagcccaaggagggccaggtgctgctggatggacagcccctg
cactgctaccagcaccagtacctgcatcagaagatggccctggtgtcccaggaaccagtg
ctcttctctggatctatcagacacaacatagagtacggcctcgtgggatgcaccctggag
aaggtgaaagaggctgcgaagagtgccaacgtccacgactttatttgtacgctggaacag
ggctacgacacagatgtaggtgagtgtggagggcagctgtcttctggacagaagcagtgc
atcgccatcgccagagctctggttcgagagccacaggtcctaattctggacgaggcaacc
agcggcatggacatcaacacacagcatgtggtgcagggcgtcctggcaggctcagtgggc
cagacagtgttggtggtggcccaccggctgcagactgtggagaaggctgaccagatcatc
ttcatggagggcggggaggtggttgagcagggcacacaccaggagctcatggctagcaag
gggcgctaccatcggctcaaagaggaactctttgaggactga
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