Salmo salar (Atlantic salmon): 106580122
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Entry
106580122 CDS
T04363
Symbol
pomt1
Name
(RefSeq) protein O-mannosyltransferase 1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00514
Other types of O-glycan biosynthesis
sasa00515
Mannose type O-glycan biosynthesis
sasa01100
Metabolic pathways
Module
sasa_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
106580122 (pomt1)
00514 Other types of O-glycan biosynthesis
106580122 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
106580122 (pomt1)
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
106580122 (pomt1)
Glycosyltransferases [BR:
sasa01003
]
O-Glycan biosynthesis
O-linked Man type
106580122 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
106580122
NCBI-ProteinID:
XP_014016291
UniProt:
A0A1S3NM56
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Position
ssa20:12831381..12846206
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AA seq
777 aa
AA seq
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MQRLNAAIVSTACRPSSRLPIYGLTDGKPCWHRNVETFRNSAKLKLMLTTGHTGAMLTSI
KLPIVIRAEINLVLVVVTALGLLSRLYGINFPKAVVFDEVYYGQFVSLYTKQVFFIDESG
PPLGHMILAFGAYLGGFDGNFIWNRIGAEYSSNVPVWSLRLIPALAGSLCVPLCYLLVVE
LGYSHLTALGAALLFLMENSLIVQSRFMLLESVLIFFLLLAVVSYLRFHNAQSGSPVRLA
WLVLTGVTCACAVGVKYMGLFTYFLLLGLAAVHTWQLIGDRALSNSVVLMQVVARFLALV
VLPLLLYLGFFYVHLNLLYRSGPHDQMMSSAFQASLEGGLARITQGQPLEVAYGSQVTLR
SVSSKPIPCWLHSHKANYPIRYENGRGSSHQQQVTCYPFKDVNNWWIIKDPGRQDLVVSS
PPRPVRHGDVVQLLHGMTSRLLNTHDVAAPMSPHAQEVSGYIDFNVSMPAQNLWKVDIAN
REAEQDVWKTILSEVRLIHINTSAVLKLSGSSLPEWGYRQLEVVGDKIYKGYQPSGVWNV
EEHRYGTSLEQRERELELHSPTHIDINRNLTFIAKFLELQWKMLTVKHEDSEHKYSSSPL
EWITMNTNIAYWLHPASNAQIHLIGNFVTWTLANLALAVYVLLFLSYLLRRRRKIEDIPE
ATWCQLLQAGVVCAGGWAVNYLPFFMMEKTLFLYHYLPALTFQILLIPVVLEHVHTHVLR
CASLRRALHGVVLAGLSSVYLSFRTFSPLTYGQPELSAEQLASLRWRDSWDILFRRR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtctgaatgcggccatcgtctccactgcatgcaggccctcaagtcgattaccg
atttatggtctcactgatggaaagccgtgctggcatcgaaatgttgagacattccgaaac
agtgccaaattaaagttaatgctgacaactgggcacacaggagccatgctgacgtctatc
aagttgcctattgtgatcagagccgaaatcaatttggttttggtggtggtgacagccctt
ggacttttgtccagactgtatggaattaacttccctaaagctgtagtgtttgatgaggtg
tactatggacagtttgtatctctctacacaaagcaggtcttctttattgatgagagtggg
ccacctcttggtcacatgattctagcatttggagcttatcttggtggatttgatggtaac
tttatctggaacaggattggagcagagtactccagtaatgtgcctgtatggagtttaaga
ctgataccggccctggccgggtcactgtgtgtacccctgtgttaccttctggtagtggaa
ctcgggtactcacacctcacagcactgggggctgcattgctcttcctcatggagaattcc
ttgattgttcagtcccgcttcatgctgctggaatctgtgcttatcttcttcctgctgctc
gctgtcgtatcctacctcagatttcacaatgcacaaagcggctcaccagtcagattggcg
tggctggtgctgactggagtcacatgtgcctgtgctgtgggagtgaagtacatgggtctg
ttcacctactttctgctgcttggcttggcagccgttcacacgtggcagcttattggggac
agagcactgagcaatagtgtggtgctgatgcaggtagtggcccgcttcctggccctcgtg
gtcctacccctactgctctacctgggcttcttctatgtgcatttgaacctgctctaccgc
agtggcccacacgaccagatgatgagcagtgccttccaggccagcctagagggaggattg
gccaggatcactcagggtcagcctctggaggtggcctatggctctcaggtgaccctccgc
agtgtgtccagtaaacccataccctgctggctacactcccataaggccaactatcccatc
aggtatgaaaatgggcgtggtagctctcaccagcagcaagtgacctgttatccgttcaaa
gatgtcaacaattggtggataatcaaagatccaggcagacaagaccttgttgtgagcagc
cctccccgccctgttcgccatggtgatgttgtccaacttcttcacggcatgacctcccgc
ctcctcaacacgcacgacgttgcagctcccatgagtcctcacgcacaggaggtgtctggc
tacattgacttcaatgtgtcaatgccagcccagaatctctggaaagtggacattgcgaac
agggaggcggaacaagatgtctggaagactattctgtctgaagtacgtttgattcacatc
aacacctcggctgtgctcaagctgagcggttcctctcttccagagtggggctacaggcag
ctggaagtggtgggggataagatctacaagggctaccagcccagcggtgtgtggaatgta
gaggagcaccgatacggcacaagtctggagcagagagagcgagagctggagctacactcc
cccacacacattgacatcaaccgcaacctcaccttcattgcaaaattcctggagctacag
tggaagatgctgacggtaaagcatgaggattctgaacacaagtacagctcttcacctcta
gaatggatcacgatgaataccaacattgcgtactggctccaccccgcaagcaatgcccag
atccacctgattgggaactttgtcacttggaccctggcaaacctcgccctcgcggtgtac
gtccttcttttcctatcgtatctattaaggaggcgacggaaaattgaagacattccagaa
gccacctggtgccagctgcttcaggcaggagtagtgtgtgctggtggctgggctgtcaac
tacctgcccttcttcatgatggagaagacactgttcctgtatcactacctgccagctctc
accttccagatcctgctgatccctgtggttctggagcacgtgcacacacacgtgctgagg
tgtgcttcactccggcgtgctcttcatggagttgtattggcggggttgtcctcggtatat
ctgtccttccggaccttcagtcctctcacctatggtcagccagaactgagcgctgagcag
ctggcttcgttgcgctggagggacagttgggacatcttgtttcgcagacgttaa
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