Salmo salar (Atlantic salmon): 106581007
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Entry
106581007 CDS
T04363
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106581007
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106581007
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
Egg_lysin
BAR_4
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
106581007
NCBI-ProteinID:
XP_014018131
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All DBs
Position
ssa20:complement(54752776..54774253)
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AA seq
931 aa
AA seq
DB search
MSRLYYRRTDNSSYRDRIALRIVRAESELSGLERNYLGAVEKGDYASVKQALEEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLTYNVYVGDALLHAIRKEVVGAVEMLLNHKK
PSGEKQVPPILLDKQFSNFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCME
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELELILNYRDDINPLLDENTNDLARLKLAIKYTQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFLTCVFIGLLFPLLSLCYLVSPKSRYGLFIR
KPFIKFICHTTSYLTFLFLLLLASQHIVSTDPNRQGPPPTVVEWMILPWVLGFIWTEIKQ
MWDGGFQDYIHDWWNLMDFVMNSLYLATISLKFVAYVKYSGFRARNEWQMWHPTLVAEAV
FAIANIFSSIRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETDEGLKGCKGIRCATQNNAFSTLFETLQSLFWSIFGLISLYVTNVEADHQFTEFVGAT
MFGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNI
IPSPKSIWYFICWIRKHIFKITRAKKTETFGTIGRRAAINVRINHQYQEVLRNLVKRYVA
AMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKVGPGGGGVALAGSKPSEEAGAS
ILVYPDHSFKYSPKFSTAKTNMFPDTTSILQQRVAPSSTSSSTSPSTSQGLNRLVNGSVV
PSWASTDTSSNPTSSTPISSSSSTPIHASTKDKLARKDFPKDICDFGLYSVSEEMGEADL
EVLDCDGEKEEQGGARERMCTEKEENEGRGE
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgactgtactacaggaggacagacaactcctcctacagggacaggatcgctctg
aggattgtcagggccgagtctgaactgtctggcctggaaaggaactacctgggagcagtg
gagaaaggagactacgcctcagtcaaacaggctctagaggaggcagagatctacttccgg
atcaacattaactgtatagacccgttgggccgcacagctctgctgatcgctatagagaat
gagaacctggagattatagagctgctgctcacctataacgtgtacgtcggtgacgctctg
ctacacgccatccgtaaagaggtggtgggggccgtggaaatgctgctcaaccacaagaag
cccagcggggagaaacaggttcctcccattcttttggacaagcagttctctaactttact
cctgacatcacacccatcatcctggcagctcacaccaacaactatgagatcatcaaactg
ctggtgcagaagggggtgtccatgccccagccgcatgaggtgcgctgtaactgcatggag
tgcgtgtccagctctgatgtggatagtctgcgtcactcccgctctcgtctcaacatctac
aaggccttgtccagcccatcactcatagctctctccagtgaagaccctttcctcacagcc
ttccagctctcctgggaactacaggaactcagcaaggtagagaatgagtttaagtcggag
tatgaggagttatctcagcagtgtaaacagtttgccaaggacctgttggaccaaaccagg
agttccagagaactagagctgatcctgaactacagagacgacatcaaccctctactggat
gagaacaccaacgacctggccagactcaaactggctatcaaatacacacagaaagagttt
gtagcccagcccaactgtcagcagctgcttgcgtctcgttggtacgatgagttccctgga
tggaggcgtcgtcactgggcagggaagttcctaacctgtgtcttcatcggcctcctcttc
cccctcttatccctctgctacctggtctctcctaagagccgctatggactcttcatcagg
aagcccttcatcaagtttatctgccacacaacgtcatatctcaccttcctgttcctgctg
ctgctggcctcccagcacatcgtctctacagaccccaacagacaggggccgcctcctacg
gttgtggaatggatgatactaccctgggtactgggcttcatctggacagagattaaacag
atgtgggatggagggttccaggactatatccatgactggtggaacctcatggactttgtt
atgaactctctgtacctggctaccatctctttgaagttcgttgcctatgtcaagtacagt
ggcttcagggccaggaacgaatggcagatgtggcatcctaccctggtagcagaggctgtg
tttgccattgctaacatcttcagctccatccgcctcatctctctgtttacagctaactcc
cacctgggacctctacagatctctctgggcaggatgctgctggacatccttaagttcctg
tttatctactgcctggtgctcctggccttcgctaacgggctcaaccagctctacttctac
tacgagacagacgagggactgaagggatgcaagggcatccgctgcgcaacacagaacaac
gcgttctcaacgttgtttgagacgctccagtcgttgttctggtctatctttgggttgatc
agtctgtatgtgaccaacgtggaggcagaccaccaattcacagagtttgtaggggccacc
atgtttggaacctataatgtcatctctctggtggttctactcaacatgctgatcgccatg
atgaacaactcctaccaacacatcgctgatcatgcagacattgagtggaagtttgcaaga
accaagttgtggatgagttactttgaagagggggggactctgccttctccattcaacatc
atccctagccccaagtcaatctggtacttcatctgctggatcaggaaacacatcttcaag
atcaccagggccaagaaaacagaaacatttggaaccatagggagacgggctgctataaac
gtaagaataaaccaccagtatcaggaggttttgaggaacctggtgaagagatatgtagca
gccatgatcagagatgccaagacagaggaaggactgactgaggagaactttaaggagctg
aagcaggacatctccagctttaggtatgaagtcctggggatgatgaaggggaaggtgggg
cctgggggtgggggcgtggctctagcaggaagtaaacccagtgaagaggcaggggcctcc
attctggtctaccctgaccactccttcaagtactcccccaagttctcaacagctaagacc
aacatgtttcccgacaccacgtccatactccagcagagggtagccccttcctccacctcc
tcctccacatccccttccacctctcagggcttgaaccgactggtcaacggctctgtggta
ccctcttgggcctccactgacacctcctccaaccccacctcctccactcccatctcctct
tcctcctccactcccatccatgcctccaccaaagacaagctggccaggaaagactttcca
aaagacatctgtgactttgggctctactctgtgtctgaggagatgggggaggctgacctg
gaggtgctggactgtgatggagagaaggaggagcagggtggagcgagggagaggatgtgt
acagagaaggaagagaacgaagggaggggagagtga
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