Salmo salar (Atlantic salmon): 106584135
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Entry
106584135 CDS
T04363
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106584135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106584135
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106584135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
106584135
NCBI-ProteinID:
XP_014024511
UniProt:
A0A1S3PA90
LinkDB
All DBs
Position
ssa23:19614609..19658878
Genome browser
AA seq
2358 aa
AA seq
DB search
MSAVLLQALERAEITKLPKAVQNKLEKLLSDLQYEIDFLKAHQEQFRVDSEQQFFEKVQR
LEQSQEQLVTQTEQHHKLREEFTKINEELKSVRENNKKCEINQEKFTSEQAQFSKAKDEL
ESEKRELVHTLERRSQEVDYLSEDLQRLNDKVAEVNSTKMGLQLKLDELESSEVNIKYRE
KRMEQEKELLQGQTAWLNGELKAKSEELLALSRQKGNEILELKCSLENKEDELNRVQDQV
TSLKTSSESLQKQTEDMISKLKEAKEQHASMEEKFRNELNANIKLSNLYKGAAADSESKS
EELSGAVEELHKLLKDAVEANKALEVKLQEMDACRIKEAAELKESISSLEKELDNANELL
SDTKLRGAASVLSEETITTMSPTAAAVAKIVKPGMKLTELYTAYVETQEALELQRVENKR
LNKYLDDIVQEVEAKGPVLKRQRDEHERMQKSVASLSAKLEQAVTEVQRLQKVTDEANKH
SSVLERDNHRSEVQLADMAQQIRVLLIELEEARGNHVALDEEVSSADISSTSEVITQHLV
TFRGVEELQQQNQRLLVALRELSDAQEREETETTGTKCSELERSLEKAQAELEALREQRS
HQMQLAESIVRQRDMYRVLLAQATGVSFPQQGAAPEEFSLTSTPHRSPAATPTTAMPTGI
ITMATESTEAVEAKAALRQLQEVFSSYKRERSESDKALAEQTEKLQQQVSDQRSQNAKIS
TQLEFTSKRYEMLQDNVEGYRKDIASLKEKGQKMAAVAQKNEQTVNTMTEDLRVAQEKLN
MAEGRAESLRKERDMLKLVESRLTQEKETIQTQQRGQNMLLTNLKTIQATLERSETDTRQ
RLSAQIEKQEREIGQLQKRLGHDVEQRHLLGRNQDLQLMDAKRQLETQTGLLQKTRDQLS
AAQLEMSSLRLQQGSEEGGRPSLGSQSSPSIPMGLKGLQGSKGDSEDLHGRLRQTETQAE
ELAEQLRTATSSKEQYRAMAQSLEESMDKERQVMEQARSSMEERVKEAQEQHRHLERKLL
EAEKEKQGLQEEKRKALASVEQQVAELRRSLSSVQADHQEALQRAAVAAAQEQQAILDSQ
EQATLASEAQDKYEREMMLHAADVEALHAVKAQALQAATLRQQLEERAQRASAQLLEARV
SWEEQERILKEEMSKVASRSEELQRQNSLLHEQIQTMSSKIATTLQRQVNESPLNISFTE
QGKSQDQVLEILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELRELQESFSAERER
MQVTAKTLAQHDELMKKTETMSVLMETNKMLRMEKERMEQELQQTQAKVRKLELDVMPMQ
ESNAELSEKSGMLQAEKRILEEDIKRWKARTQQLVSQQKDPEEYKRLHFEKEAHLKRIQQ
LTEETGRLKAEVTRSGVSVTSLQSQVQMLREGLGKVSSERDALRRDVEAKNLDIQEKFRT
ITQVRKIGRRYKTQYDELKVEHDKMVSEAASTPAQEQEAQQASAQELQGLRDSLGQSETR
TRDLEGQLDNLNKVVAEREAEVRGAQEQASGLQTELTRLRQELQEKASQEDTLRQQMSEK
EEKTRKAFVGAKQKINQLIGSKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQERE
LRDLREQQERHGEQRDEPPEQGLGKAQEQQRTTEQRGPLKTTPAADRGSASTSEPPTANI
KPTPLGAQGQSKPPVNPGNKSTPRASIRPMITPATVPTPTPTATVMPTTQVENQEAMQSS
EGPLEHVTVYGSASGSVRSTSPSVQTANPVLVVQQTQTTAFVQPTQQQSLPHTEPANQEQ
PLAPVVIEAAPSSQVERPSTSTAVFGTVSATPGTSSMSKRPREEEQDTATVTDTDTPQED
PSEPPIPKKLRIIQRVDPEEPEAQEEVLAESSTEGLVPGESHEAPESSQQVVEEYPVLDE
ADEGTASQSVPVELLLSQPTEVTLSYDSPEESSQHDVIVIVTDSESEDEQEDDEEEEPDY
DEEEEEEDEDEEDGGMGEEGEESNEGSGDGNEAYEDDYTEGADATDPGTETEESLGASDS
TQRPDDSQTHSFEGSSSMEAFSSEPTSSAPRMPRSPRRAPHPLPPRLNITQELGPPAQVQ
RSMRRQSVGRVPQLTPGMASSGQHYFDDDDRMVPSTPTLVLPHRSDGFAEAIHSPQVSGV
PRFRFGTPEDLISQTTTSHSDLGQLASQGGLGMYDSPLFLPGHEDESGGRSVPTTPLQMA
APVSIFTEVPPLDCTEHSSLSVPMVTTSTPGQSVAGGPPPGDESDVLMEPEGDRVEVSLE
PVASQAGEMEEPAQPSDDASLPSTNQEPSSSSADTSSTQPKPSRPGPSRQLQRWTENHMR
RGTLPSRGVTGTGRRFAR
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtgctactacaagctctggagcgcgctgagataacgaaactcccgaaagct
gttcaaaataaactggaaaagctcttgtctgacctgcaatatgaaatagatttcctcaag
gcacatcaggagcaatttagagtcgatagtgaacaacagttctttgagaaagtgcagcgt
cttgagcaaagtcaggaacagttagtgacccagactgaacagcaccacaaactccgagag
gagttcaccaagatcaatgaagaactcaagagtgtgcgggaaaataataaaaagtgtgaa
atcaaccaagaaaagtttacatctgaacaggcccagttctcaaaagccaaagatgagctg
gagtcagagaagagggagcttgtgcatacactggagaggagatctcaggaagtggactat
ctgagtgaggacttgcagcgcctcaatgacaaagtggcagaagtcaattcaacaaagatg
gggctgcagctcaagctggacgagctcgaatcctcagaggtcaacatcaagtaccgtgag
aagcgtatggaacaggagaaggagctgttgcagggccagacggcctggttgaacggagag
ctcaaggctaagagtgaggagctgctggccctgtcacgtcagaagggcaatgagatcctg
gagctcaagtgcagccttgagaacaaagaggatgagttgaacagagtccaggaccaagtg
acaagtttaaagacttcaagtgaaagccttcagaagcagactgaagacatgatcagcaaa
ctgaaagaggctaaggagcagcacgctagcatggaggagaagtttaggaatgagctgaat
gccaacataaagctctccaacttgtacaagggagctgctgcagactctgagtccaagagt
gaggagttgagtggggctgtagaggagctgcacaagcttctgaaggatgctgtagaagcg
aacaaggccctggaggtgaaactgcaggagatggatgcctgtcggatcaaggaggctgct
gagctgaaggagagtatctccagtctggagaaagaactggacaacgccaacgaacttcta
tctgacaccaagctcagaggtgcagcctcagtgctgtcagaggaaacgattaccaccatg
tccccaactgcagccgccgtggccaagattgtcaaacctggcatgaagctgactgagttg
tatacggcgtatgtggagacccaggaggcgctggagctgcagcgtgtggagaacaaacgg
ttgaataagtacttggatgacatagtgcaggaggtggaggccaagggtcccgtcctcaaa
cgccagcgggacgaacatgagcgcatgcagaagtctgtggccagtctgtcggccaagctg
gaacaggcagttacggaggtgcaacgtctgcagaaggtgactgacgaagccaacaagcac
tcttctgtcctggagagagacaaccataggtctgaggtgcaactggcagacatggcgcag
cagatccgtgtcctactcattgagctggaggaggcacgtggcaaccacgtagcgctcgat
gaggaggtgagctctgctgacatcagcagcacgtcggaggtcatcacacagcacctggtg
acattccgtggcgtggaggagctccagcagcagaaccagcgcctcctggtggccctccga
gagctcagcgacgcacaggagagagaggagactgagaccacaggcaccaagtgcagtgag
ctggagcggagtctggagaaggcccaggcagagctggaggctctgagggagcagcggagc
caccagatgcagctggctgagtccattgtcaggcagagagacatgtaccgtgtgctcctg
gctcaggccactggagttagcttccctcagcaaggtgcagcacctgaggaattctccctg
acctccaccccccaccgctctccagctgccacccccaccacagccatgcccactggaatc
attactatggcgacagagtcaaccgaggcggtggaggccaaggcagccctccgacagttg
caggaggtgttctcctcctataagagggagaggtctgagagtgacaaggccctggcggaa
cagactgagaagctacagcagcaggtgtctgaccagagatcacagaatgccaagatatcc
acccaactggagtttacctccaagaggtatgagatgctgcaggataatgtggagggctac
aggaaggatattgcctctttgaaggagaagggacagaagatggctgctgtagcccagaag
aatgagcaaactgttaacaccatgacagaggacctgagagttgcacaggagaaactcaac
atggcagagggtcgtgctgagagcctcaggaaggagagggatatgctgaagctagtggag
tccagactgacccaggagaaggagaccatccagacccaacaacgaggacagaacatgctg
ctcaccaatctcaagaccatacaggccacattggagcgctcagagactgacaccaggcag
cgcctgagcgcccagatagagaagcaggaaagagagatcggccagctgcagaagagactg
gggcacgatgtggagcaacgccacctgctgggcagaaaccaagatttgcagctgatggat
gccaaaaggcagctggagacccagacaggcctgctccagaagaccagggatcagctgagt
gctgcccagctggagatgagctctctcaggctgcagcagggcagtgaagaaggaggtcgt
ccgtcgctgggctcccaaagctccccgtccattcccatgggcctcaaaggactccagggt
tcaaaaggggactctgaggatctccatggccgcctgaggcagaccgagacgcaggcagag
gagctggcagagcagttgaggacagccacctccagcaaagagcagtacagagccatggcc
cagagcctagaggagtccatggataaggagaggcaggtgatggagcaggctcggtcctcc
atggaggagcgtgtaaaggaggctcaggagcagcaccgtcatctggagaggaagctcctg
gaggcagagaaggagaagcagggcctgcaggaggagaagaggaaagccctggcctccgta
gagcagcaggtggctgagctgaggaggagtctgagcagtgtgcaggcggaccaccaggag
gcgctacagagggcagcggtggcagcagcccaggaacagcaggccatactggacagccag
gagcaggccacgctggcgtcggaggctcaggataagtacgagcgtgagatgatgctacac
gctgcagacgtggaggctcttcatgcagtgaaggcccaggctctgcaggcagccacgctc
agacagcagctggaagagagggcccagagagcctctgctcagctgctggaggccagagtc
tcctgggaggaacaggagaggatcctcaaggaggagatgtctaaggtggcgtctcgctct
gaggagctgcagaggcaaaacagcctcctccatgaacagattcagaccatgagcagcaag
atagccaccaccctgcagcgccaggtcaacgagagccctctgaacatctccttcactgag
cagggaaagtctcaggaccaggtcctcgagatactcaggtttgtgcgtcgggagaaggag
atagcggagtcacggttcgaggtggcccagggagaaagtcttcgccacaggctgagagtg
gagcacctggagagagagctgagagaactgcaggagagctttagtgctgagcgagaaagg
atgcaggtgacagctaagaccctggctcagcacgatgagctgatgaagaagactgagacc
atgagtgtcctgatggagaccaacaagatgctgcggatggagaaggagaggatggagcag
gagctgcagcagacgcaggctaaagtgcgtaagctggagttagacgtaatgcccatgcag
gagtccaacgctgagctgagtgagaagagcggcatgctgcaggcagagaagaggattctg
gaagaggacatcaaacgctggaaggccagaacacagcaactggtgagccagcagaaggac
ccggaggagtacaagcgtctccactttgagaaagaggctcacctcaaacgcatccagcaa
ctcactgaggagacaggcaggctcaaggctgaggtgaccaggagtggcgtgtcggtgacg
tccctgcagagccaggtgcagatgctgcgtgaaggcctggggaaggtgagctctgagagg
gatgctctgaggagggacgtggaggccaagaacctggacatccaggaaaagttccgcacc
atcactcaggtcaggaagatcggccgccgctacaaaactcagtatgatgagctcaaggtg
gagcacgacaagatggtgtcagaggcagcatccacaccagcccaggagcaggaggcccag
caggcctcagcccaggagctccagggtctgagagactccctgggacagtctgagacccgg
actagagacctggagggacagctggataacctcaacaaggtggtggctgagcgtgaggca
gaggtgcgtggggcccaggagcaggcctccgggcttcagacggagctgaccaggttgaga
caggagctgcaggagaaggcctcccaggaggacaccctcagacagcagatgtctgagaag
gaggagaagaccaggaaagccttcgtaggggccaagcagaagatcaaccagctcatcggc
tccaaggaccagctgcagaaggagaacgaggagctgaagcaacagagggaggagctggag
gtcagggtcagtgctctgaagtcccagtacgagggccgtctgagtcgccaggagagggag
ctgcgggacctgagggagcagcaggagagacacggggagcagagggacgagcctcctgaa
cagggcctcggcaaggcccaggaacagcagaggaccaccgagcagagaggaccactgaag
accaccccagccgcagacaggggcagcgccagtacctcagagccccccactgccaacatc
aagcccactcctctgggggcccagggccagagcaagccccctgtcaaccccgggaacaag
tccactccccgggccagcatccggcccatgatcacccccgccactgtgcccaccccaact
cctactgctaccgtcatgcccaccacacaggtggagaaccaggaagccatgcagtcttct
gagggcccgctggagcatgtgaccgtgtatggcagtgccagcggttcagtacggtcaacc
agccccagcgttcagaccgccaacccagtgctggtggtccagcagacccagaccacagcc
ttcgtccaaccaacacagcaacagagcctgccccacactgaaccagccaatcaggagcag
cccttggccccagtcgtcattgaagctgcacccagctcgcaagtggagaggccttcgacg
tccacagctgtgtttgggacagtttcagccactccagggacatcctccatgtccaagaga
ccgcgtgaggaggagcaggacaccgctacggtgactgacacggacaccccccaggaggac
ccgtctgaaccccccatccccaagaagctacgcatcatccagagggtggacccagaggag
ccagaggcccaggaggaggtgctggctgagagcagtacagagggattggtgcctggagag
agccatgaggccccagagagcagccagcaggtggtggaagagtacccagtactagacgag
gccgatgaggggacagcatctcagtctgtccccgtagagctactcctgtcccagcccaca
gaggtcacactctcatacgactcccccgaagaatcctctcagcacgacgtcatcgtcata
gtgactgactcggagagcgaggatgagcaggaggatgacgaggaagaggaaccggactat
gatgaagaggaggaggaggaagatgaggatgaagaggatggcgggatgggagaagaggga
gaggagagcaacgaaggtagcggagacggcaacgaggcatacgaagacgactacacagag
ggtgctgacgcgacagacccaggcacggagacggaggagagtctaggagcatcggactcc
actcagcgcccggacgactcccagacacacagctttgagggcagcagcagtatggaagcc
ttctccagtgaaccaaccagttctgctcccagaatgccccggtcaccacggagggcaccc
cacccgctgcccccccgtctcaacatcacccaggaactgggcccccctgctcaggtacag
cgctccatgcgtcgccagtctgttggcagagtccctcagctcacccctgggatggccagc
agcggacagcactactttgacgatgatgacaggatggtgcccagtactccaactctggtg
ttgccacaccgctctgacggctttgcagaagctatccattctccccaggtgtctggtgtt
ccccggttcaggttcggcaccccagaggacctgatatcccagaccaccacctcccactct
gacctgggacagctggcatcacaaggaggtctggggatgtatgatagtcctctgttcctg
ccaggtcatgaggatgagtctgggggccgcagtgttcccaccacacccctgcagatggct
gccccagtgtccatattcacagaggtcccgcccttggactgcaccgaacactcctccctg
tctgttcctatggtaaccacctctaccccgggccagtcggtggctggaggtccccctcct
ggggacgagagcgatgtcttaatggagcctgagggagaccgtgtggaggtgtctctggag
cctgtggcgtctcaggcaggggagatggaggaacctgcccagccctcagacgacgcaagc
ctgccttctaccaaccaggaaccctcctccagctctgcagacacgagtagcactcagccc
aaaccctcgagaccaggacccagccgacagctccaacgctggacagagaaccatatgagg
agagggacgttgccatcacggggtgtaactgggactgggaggagattcgccagatga
DBGET
integrated database retrieval system