Salmo salar (Atlantic salmon): 106584227
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Entry
106584227 CDS
T04363
Symbol
rab42
Name
(RefSeq) RAB42, member RAS oncogene family
KO
K07925
Ras-related protein Rab-39B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106584227 (rab42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106584227 (rab42)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
sasa04031
]
106584227 (rab42)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
106584227 (rab42)
GTP-binding proteins [BR:
sasa04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
106584227 (rab42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_24
Motif
Other DBs
NCBI-GeneID:
106584227
NCBI-ProteinID:
XP_014024759
UniProt:
A0A1S3PB42
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All DBs
Position
ssa02:35569749..35590132
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AA seq
219 aa
AA seq
DB search
MDLTLWQYQFRIIMLGDSTVGKSSLLKRYTEEMFLDCINQTVGVDFYVHFLEVEPGVRVK
LQFWDTAGQERFRSVTRSYFRNSVGGLLVFDLTNRASFEHVQEWHAEVCEHVQPHTVLFV
LVGHKNDRVAQGERVVGHNEAEKLAGQLGMPYIEASAKTGQCVTEAFELLTRRVYQGLLS
GEVQLQEGWDGVKCLAPRATLGQLQNPKINIPNNRRCCS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggacctgactctgtggcagtaccagttcaggatcatcatgttaggggactcgacagtg
ggcaagtcgtccctgctgaagcgttacacagaggagatgtttctggactgcatcaaccag
acagtaggggtggacttctacgtgcacttcctggaagtggagccaggcgttcgggtcaaa
ctgcagttctgggacacagcaggccaggagaggttcaggtcagtgactcggtcctacttc
cgtaactcagtggggggcctgctggtgtttgacctgactaaccgtgcttcctttgagcat
gtgcaggagtggcacgcagaggtgtgtgaacatgtgcagccccacacggtgctgtttgta
cttgtgggccacaagaatgaccgggtggcccagggagagcgggtggtgggccataacgag
gctgagaaactggcaggccagctggggatgccctacatcgaggcgtcggctaagactggt
cagtgtgtgacggaggcttttgagctgctgacccgtcgggtgtaccagggcctgctgagt
ggggaggtgcagctacaagagggctgggacggggtgaagtgcttggctccacgtgcaacc
ttaggacagctacagaatcccaagatcaatatacccaacaacagaaggtgctgttcctga
DBGET
integrated database retrieval system
