Salmo salar (Atlantic salmon): 106586196
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Entry
106586196 CDS
T04363
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106586196
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106586196
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
PFF1_TM
GPHH
Zip
ATP-synt_B
IQ
New_glue
Motif
Other DBs
NCBI-GeneID:
106586196
NCBI-ProteinID:
XP_014028663
UniProt:
A0A1S3PLV2
LinkDB
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Position
ssa25:13346793..13401121
Genome browser
AA seq
1999 aa
AA seq
DB search
MAQLLVPPGPDSFRPFCRESLDAIERRIADENAKKSKAKPNNNDDDGPKPSSDLEAGKSL
PLIYGDIPKGLVSTPLEDLDTFYSNQKTFIVLNRGKAIFRFNATPALYVLNPFNPLRRIS
IKVLVHSLFSMVIMLTILTNCAFMTLSQPPDWAKNVEYTFTGIYTFESLIKILARGFCVG
KFTFLRDPWNWLDFCVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRNKCLRIPLNSTDLFDDSFDFNGTDLNK
TKSFNWTYYMNDPKNYYYLPGKKDALLCGNGSGAGLCPEGFWCIKAGRNPDYGYTSFDTF
SWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMAYDE
QNQATIEEAQQKEEEFQKLKKQQEDAQAAAAVTAAESGEFSERGELTDTSSEASKLSSKS
AKERRNRRKKKKQREEEERGDNDKFHRSESEGSVQKSRFRFSIDASNLLNYDMRCSTPHQ
SFLSIRGPLFSSRRNSQASLFSFRDRAQDMGSENDFADDENSTFEDNESRRGSLFVPRRS
DRRSSNLSQNSMSSHVLLPANGKKHSSVDCNGVVSLVGGASLPTSPEGLLLPEVTVDKAS
TDDNGNTTETEYRKARCESYQASMNFLEDPGARQRAFSVASVITNTMEELEESRQECPPC
WYKFSNTFLIWDCCPAWLRIKKTVKMIVMDPFVDLTITICIVLNTVFMAMEHHPMSGDFK
KMLSVGNLVFTGIFTAEMCFKIIALDPYCYFKEGWNIFDGIIVSLSLMEIGLANVSGMSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYR
DCVCKISTDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLTVAIGRIHQGIAFVKALVCRSFHSI
CLRKKKGSLDDLHRTNYNSNHTTVEIMKDPEYVKDDNGTTGGVGMGVGSNAAGKYIVNDN
TDYMQFIHNPSLTVTVPIAVGESDFENLNTEDFSSYSSDIEGSKEQLAKDRPLSSSEGST
VDIRAPGEREGSVDMEPEESMEAEGCFTDGCVRRFQCCQVNVEEGKWKMWWTLRKTCFRI
VEHNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTLLEFADKIFTYIFILEMLLKWVAY
GFAKYFTNAWCWLDFLIVDVSLVSLVANALGYAELSAIKSLRTLRALRPLRALSRFEGMR
VVINALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYHCINMTTSDRFEVRDVANKT
ECLALTGTHWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLDDQPDYEVNLY
MYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPVNKFQGFVFDFITKQAFDIVIMILICLNMVTMMVETEDQTDDIRKILYKINL
VFIVMFTGECILKMISLRQYYFTIGWNVFDFIVVILSIIGMFLSELIEKYLVSPTLFRVI
RLARIGRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKE
SGIDDMFNFETFGNSMICLFQITTSGGWDLLLAPILNKGEPDCDSRKEHPGSTYKGGDCG
NPPVAIIFFVSYIIICFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDA
RATQFMEYDKLSDFADALDPPLRISKPNKIQLISMDLPMVSGERIHCLDILFAFTKRVLG
EGEGLDILRGQMEERFMASNPSKVSYEPITTTLRRKLEDMSALVIQRAFRRYLLKRIVKR
ASAMYKEKMQSGGTLLDKEVLVIDKFNEISTSDRTDMTPSTASPPSYDSVTKPEKNKYKK
DKRKKEVKEKKKYMDVGKI
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgccaggaccagacagcttccgcccgttttgtcgtgagtcc
ctcgatgccatcgagaggcggatcgctgacgagaacgccaaaaagtccaaggcgaagccc
aacaacaatgatgacgacgggcctaagcccagcagtgacctggaggcgggcaaatcactg
ccactcatatatggggacattcccaaaggattggtgtccacaccactggaggacttagac
accttctacagcaaccagaaaacctttatagtgttgaaccgagggaaggccatcttccgc
ttcaacgccactcctgccttgtatgtcttaaaccccttcaaccctcttagaagaatatca
attaaggttttggtacactcattgttcagcatggtaattatgttgactatccttaccaac
tgtgcgtttatgaccctgagtcagcccccggactgggcaaagaatgtagagtacacattc
actggaatctacacatttgaatctcttataaaaattctggcaaggggcttctgtgtaggg
aagtttacctttctccgagacccatggaactggttggatttctgtgttattgtcatggca
tatgtcacagagtttgtggacctgggcaatgtctcagcactgagaacgttcagggttctc
cgagctttgaaaactatatcggtcatcccaggcctcaagaccattgtgggagcgctgatc
cagtcagtgaagaaactgtccgacgtgatgatcctcactgtattctgcctaagtgtcttt
gccctggtagggctgcagttgttcatggggaatttaagaaacaaatgtttaaggatccct
cttaactcaaccgacctcttcgatgattcattcgactttaatgggacggacctcaacaag
accaagtcgttcaactggacctattacatgaacgatcccaaaaattattactacctccca
ggtaaaaaagatgctttgctttgtggaaatggcagtggtgctgggctgtgcccagaggga
ttctggtgcatcaaagcgggccggaacccagattacggctacaccagctttgacacgttc
agctgggccttcctgtctctgttcagactgatgactcaggactactgggagaacctctac
cagcagaccctgagggctgctggtaagccatacatgatcttctttgtgttggtcatcttc
ctgggctccttctaccttatcaacctaatcctggctgtggttgccatggcctacgacgag
cagaaccaggccaccattgaggaggctcagcagaaggaggaggagtttcagaagctgaag
aaacagcaggaggacgcacaggcggcggcagcggtgacagcggctgagagcggggagttc
agtgagagaggggagctcactgacacctcctcagaggcctccaaactcagttccaagagc
gccaaagagagacgcaacaggcgcaagaagaaaaagcagagagaggaggaggagagaggg
gacaatgacaagtttcacaggtctgagtctgagggcagtgtgcaaaagagtcgtttccgc
ttctccatagatgcctccaacctgctcaactacgacatgagatgttccacaccacaccag
tccttcctgagtatccgtggacccctgttctcatccagacgaaacagccaggcaagcctc
ttcagcttccgggaccgagcgcaagatatgggctcggagaacgactttgccgacgatgag
aacagtactttcgaggacaacgaaagtcgccggggatctctgtttgttccccggcggagc
gaccggcgctccagcaacctcagccagaacagcatgtcgtcacatgtcctgttgccggcc
aatgggaagaagcacagctccgtggactgcaatggggtggtgtccctggtgggcggggct
tcacttcccacatcacctgagggactccttctgccagaggtgacagtagataaagcctct
accgatgacaacggcaacactacggagacagagtacagaaaggcccgatgtgaatcgtac
caggcctctatgaacttcctggaggacccaggggccaggcagagggccttcagtgtagct
agtgttataactaatactatggaagaacttgaagagtcgagacaggagtgccctccttgc
tggtacaagttctccaacaccttcctcatctgggactgttgtccggcatggctgaggatc
aagaagacagtcaagatgatcgtgatggacccttttgtagacctgactattaccatatgt
attgttctgaacacagtgttcatggctatggagcaccacccaatgtctggggatttcaaa
aaaatgctttctgtgggaaacctggtgtttacaggtatcttcacagctgagatgtgtttc
aagattattgctttggatccgtactgttattttaaggaaggctggaatatatttgatggt
atcattgtcagtttgagcttgatggagattggcttggccaacgtgtctggaatgtctgtc
ctcagatcattccgattgctgagagtattcaaactggcaaagtcttggcccacactgaac
atgctgatcaagatcattggtaactcagtgggggctctgggtaacctcaccctggtcctg
gccatcatcgtcttcatcttcgcggtggtgggcatgcagctgtttgggaagaactacaga
gactgtgtgtgtaagatctctacagactgcacactgccccgctggcacatgcatgacttc
ttccactccttcctgattgtgttccgggtgctgtgtggggagtggatcgagaccatgtgg
gactgtatggaggtggctggccagagcatgtgtctcatcgtcttcatgatggtcatggtc
atcgggaacctggtggtcctgaatctgttcctggccctgctgctgagctcgttcagtgct
gataacctggcggccacggatgatgacagcgagatgaacaatctgacggtggccataggc
cgcatccaccagggcatcgcctttgtcaaggccttggtgtgccgctccttccacagcatc
tgtctgaggaaaaagaaggggagcctggatgacctccacagaaccaactacaactccaac
cacaccactgtggagatcatgaaagaccctgaatacgtgaaggatgacaatggcaccacc
ggtggggtaggcatgggagtgggtagcaatgcagcagggaaatacatagtcaacgacaac
actgactacatgcagttcatccacaaccccagtctgaccgtcacggtgcccatcgctgtg
ggggagtcggactttgaaaacctcaacactgaggacttcagcagctattcctcagacata
gagggaagcaaagagcagctagctaaagaccgtccactgagctcatcagagggcagtaca
gtggacatcagggccccaggagagagagagggctcggtggacatggagcctgaggagtct
atggaagctgaaggatgcttcactgatggctgtgtccgtagattccaatgctgccaagtg
aacgttgaggagggcaagtggaagatgtggtggacattgaggaagacctgcttcaggata
gtggagcacaactggtttgagagctttatcatcttcatgatcctgctcagcagtggagca
ctggcatttgaggacatctacatcgaacagaggaagaccattaagacattgttggagttt
gcggacaaaatcttcacctacatcttcatcctggagatgttgctgaaatgggtggcctat
ggattcgccaaatacttcaccaacgcctggtgctggttggactttcttattgttgacgtc
tctttggtcagccttgtggccaacgccctgggctacgctgagctgagtgccatcaagtcc
ctgaggacactgcgagcactgaggcccctgagagcgctgtcccgcttcgagggcatgagg
gtggtcataaacgctctgcttggagccatcccctccatcttcaatgtgctgctggtctgc
ctcatcttctggctcatcttcagcatcatgggtgtcaacctgtttgcagggaaatactac
cattgtatcaacatgaccacgagtgatcgcttcgaagtcagagacgtggctaacaagaca
gaatgtttggctttgacaggtacccactggaagaatgtcaagatcaactttgataacgtg
ggagcaggctatctggcactgttacaagtggctacattcaaaggctggatggacatcatg
tatgcagctgtggactctcgcaatttggatgatcaacccgactacgaagtgaatctgtac
atgtatctgtactttgtggtattcatcatatttggatccttcttcacactcaatctcttc
attggtgtcattatagacaacttcaatcagcaaaagaaaaagtttggaggtcaagacatc
ttcatgacagaggaacagaagaaatactacaatgctatgaagaagcttggctcaaagaaa
ccccaaaagcctatccctaggccagtgaacaagtttcaagggtttgtctttgatttcatt
acaaagcaagccttcgacattgtcatcatgattcttatatgccttaatatggtcaccatg
atggtggagacggaagaccagacagacgacattcgtaaaattctctacaagatcaacctg
gtgtttattgtcatgttcaccggagagtgtattctgaagatgatctcactccgacaatac
tattttaccattggttggaatgtatttgactttatcgttgtcatcctgtcgataattggt
atgtttctctcggaactgatagagaagtacttggtttcaccaaccttattccgagtcatt
cgactggcccgaattggtcgtatccttcgcctcatcaagagtgctaagggaatccgtaca
ctcttgtttgcgttgatgatgtcacttcctgcattgttcaacattggtcttctgctcttc
ttagtgatgtttatctatgcaatctttggcatgtcaaactttgcatacgtcaagaaggag
tctgggattgacgacatgttcaactttgagacgttcggcaacagcatgatctgcctgttc
cagatcaccacgtcagggggctgggatctcctgctggcccccatcctcaacaagggagag
ccagactgcgacagccggaaagagcacccaggaagcacgtacaaggggggagactgtgga
aacccccctgtggccattatcttctttgtgagctacataataatctgtttccttgttgtg
gtcaacatgtacattgctgtcatcctagagaacttcagtgtggccactgaggaaagcgct
gagcccctgagcgaggatgactttgagatgttctatgaggtctgggagaagtttgatgcg
cgggccacccagttcatggagtatgacaagctgtcagactttgctgatgccctagacccc
ccgctacgcatctctaagcccaacaagatccagttgatctcaatggatttacccatggtg
agtggggagcgcatccactgcctggacatcctgtttgccttcaccaaacgtgtcctgggc
gagggggaaggcttggacatcctcaggggtcaaatggaggagcgatttatggcctccaac
ccctccaaggtgtcctacgaaccaatcaccaccacactgcgccgcaagctagaggacatg
tctgccctggtcatccagagagctttcagacgatatcttctcaagcgtattgttaagcgg
gcctctgccatgtacaaggagaaaatgcaaagtggaggcacgctccttgataaagaggtt
ctcgtcatagacaaatttaacgagatctctacttcagacagaactgacatgacaccctcc
acagcttctcccccatcatatgacagtgtcacaaaacctgaaaaaaacaaatataaaaaa
gacaagagaaagaaggaggtgaaggagaaaaaaaagtacatggatgttgggaagatttag
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