Salmo salar (Atlantic salmon): 106587575
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Entry
106587575 CDS
T04363
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106587575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106587575
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106587575
Enzymes [BR:
sasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
106587575
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
106587575
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
106587575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
106587575
NCBI-ProteinID:
XP_014031569
UniProt:
A0A1S3PWI8
LinkDB
All DBs
Position
ssa26:29206093..29238954
Genome browser
AA seq
648 aa
AA seq
DB search
MDPRIAWFQPEQRGPANSLWMQIWETTQGLGNLYFNNNCNTGSLSSTSSLSPKSNINGTL
GNEISSKNGAVINSEPRNKGMSNSTKDIDVVEQRDFIPLEANNNHNNRSSLGRGSGGWQV
GTRVSGVSGHPNKRKRDNKASTYGFNSSLETGGCGYTGTPWKVKNYSEGILGLHEEINDF
YKHMSPRAEEERMRMEVVDRIERVIKDLWPTADVQVFGSFSTGLYLPTSDIDLVVFGNWE
NLPLWTLEEALRKKNVTDENSIKVLDKATVPIIKLTDFRTEVKVDISFNVKNGVKAALLI
KDYKKKYPVLPKLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHYREDACSPNA
NVGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKSTDLYRPSMLFIEDPLAPDN
DVGRSSYGVLQVKQAFDYAYVVLNHAVSPIAKYYPNNESESILGRIIRVTQEVAEYRDWI
TKHWGPQSQNEPARNGNDVTLLVKPQQLDECNNNLTEEVTASRSKTSSNSSSLASSSSST
VSSSSDVDSDGTPCKTVKQLPGRGSSAHRESSGGVTNHRTQRHTTSTPTDNKGGKARLFR
SSSKNTHHVQQNSSSSNIKSHPSSKPHYQGNSKKRKPQQHSEAQDLCR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagaatcgcttggtttcagccagaacaacgtgggccagccaacagcctgtgg
atgcagatttgggaaacaacacaaggactggggaatctgtacttcaataacaactgtaac
acgggtagtttgtctagcacgtcaagcctcagtccgaaatcgaacatcaacgggacattg
ggtaacgagatctcgagcaagaacggagctgtcattaacagcgaacccaggaacaaggga
atgtccaactcaacgaaagacatagatgtggtcgaacaacgagactttattccgttggaa
gctaataacaaccacaacaaccgttcatcgttggggaggggcagtggagggtggcaagtg
ggcactcgggtctctggggtctcaggacaccccaacaaaaggaaaagagataacaaggct
agcacttatggattcaacagtagcctcgagaccggaggctgtggttacacgggaacacca
tggaaagtcaagaactactctgaaggaatcttggggctccatgaggagatcaatgacttc
tacaaacacatgtctcctcgggcggaggaggagaggatgaggatggaggtggtggacagg
atcgagagggtcatcaaagacctgtggcccactgctgacgttcaagtgtttgggagtttc
agcacgggcctctatctgccaaccagtgacatcgatctggtggtgtttgggaactgggaa
aacctgcccctttggaccctggaagaggccctgcggaagaaaaacgtgactgacgagaac
tccatcaaagtgctggacaaggccacggtacccatcatcaagctgacagacttccgcaca
gaggtgaaggtggacatcagcttcaatgtgaagaatggagtcaaagctgcccttctcatc
aaagactacaaaaagaaatacccagtgcttccgaagctggttctggtgctgaagcagttc
ctgctccagagggatctgaacgaggttttcactggagggatcggctcctacagcctcttc
cttatggctgtcagcttcctgcagcttcactacagagaagatgcgtgcagccccaatgcc
aacgtgggcgttctccttatagagttctttgagctctatgggcgccacttcaactacctg
aagacgggtatccggatcaaagatggcggcagctatgtggccaaagacgaggttcagaag
agcactgacctctacaggccctccatgctcttcattgaggaccccctagcaccagataat
gacgttggccgcagctcatacggtgtgttgcaggtgaagcaggcctttgactatgcctac
gtagtgctcaaccacgccgtatcgcccatcgccaagtactaccccaacaacgagtctgag
agtatactcggcagaataattcgggtgacccaggaagtggctgagtacagggactggatc
accaagcactggggaccacagtctcagaatgaacctgcacggaatggaaatgatgtcaca
ctgttggtgaagcctcagcagctggacgagtgcaacaacaacctgacggaggaggtgact
gcatctcgcagcaagacctcctccaactcctcctcattagcgtcatcctcatcctccacg
gtatctagttccagcgacgttgattctgacgggacgccctgtaagacagtgaagcaactg
cctgggcggggctccagcgcccacagagaatcctcaggtggcgtgaccaatcacagaaca
cagaggcacaccaccagcactcctactgacaacaaggggggcaaggccaggttgttccgc
tcgtccagtaaaaacacccaccatgtccagcagaactcgtcctcatccaacatcaagagc
cacccaagcagcaagccacactaccagggcaacagcaagaaaaggaaacctcagcagcac
tcagaggcccaggacctctgcagatag
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