Salmo salar (Atlantic salmon): 106590025
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Entry
106590025 CDS
T04363
Symbol
ITB1
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03271
Virion - Rotavirus
sasa04145
Phagosome
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04514
Cell adhesion molecules
sasa04530
Tight junction
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
106590025 (ITB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106590025 (ITB1)
04514 Cell adhesion molecules
106590025 (ITB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106590025 (ITB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106590025 (ITB1)
04530 Tight junction
106590025 (ITB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106590025 (ITB1)
04810 Regulation of actin cytoskeleton
106590025 (ITB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106590025 (ITB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106590025 (ITB1)
04515 Cell adhesion molecules [BR:
sasa04515
]
106590025 (ITB1)
04090 CD molecules [BR:
sasa04090
]
106590025 (ITB1)
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
106590025 (ITB1)
Exosome [BR:
sasa04147
]
Exosomal proteins
Proteins found in most exosomes
106590025 (ITB1)
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin beta subunits
106590025 (ITB1)
CD molecules [BR:
sasa04090
]
Proteins
106590025 (ITB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
106590025
NCBI-ProteinID:
XP_014035981
UniProt:
A0A1S3Q7U7
LinkDB
All DBs
Position
ssa29:1665453..1716202
Genome browser
AA seq
802 aa
AA seq
DB search
MDLKLLLVSTLLAVICYSSAQQEGNECIKANAKSCGECIQVGAKCGWCTDPEFLKQGEAT
STRCDELESLRKRGCGGAKVENPRGSQWVLKNKAVTNRNKGAKKLRPEDITQIQPQKLTL
SLRSGEPQSFNLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTQLMLEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQEFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAITEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLAEGVTITYQSRCKNGVTGEGEMGRKCSNISIG
DEVSFNISITAKQCPKMGKPETIKIKPLGFTEEVEIALNFICECDCHKNGTENSEICHNG
NGTYECGACRCNEGRIGRHCECSTNEVTSEDLDKNCRKDNGTDICSNNGDCVCGSCECKK
RENPEERYSGKFCDCDNFNCDRSNNKLCGGHGRCECRVCICDANWTGSACDCSLDTTTCL
ASNKQICNGRGTCECGTCKCTDPKFQGPTCEICPTCPGVCAEHKECVQCRAFGTGEKKET
CERDCSYFNLIKVKDRDKLPQPGQAFPLMHCKERDANDCWFYYTYAVNNNTEKEVHVVET
LDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN
PIYKSPINKFQNPIYGRKAAVL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaaactacttctggtatcaacattgttagcagtcatttgttacagcagtgcg
cagcaagaagggaacgagtgcatcaaggccaatgccaaatcctgtggggagtgtattcaa
gtgggagcgaaatgtggatggtgcacagacccagagtttcttaagcagggtgaggccacg
tcgacccgctgtgacgagctggaatccctgaggaagagaggttgcggcggcgccaaggta
gagaacccccgaggcagccagtgggtcctgaagaacaaggctgtgaccaaccgcaacaag
ggagcaaagaaactcagaccagaggatatcacacagatccagccccagaaactcaccctt
agcctcagatctggtgaaccccagtcttttaatctgaagttcaaacgagctgaggattac
cccatcgacctctactacctgatggacctctcctactcaatgaaggatgatctggaaaat
gtaaagaacctgggaacacagctgatgctggagatgtcaaagatcacatctgatttcaga
attggttttggttcctttgttgagaaaactgtgatgccttacataagcaccaccccagcc
aagctgctgaacccctgtactggggaccagaactgcaccagtccattcagctataagaac
gtcctgaagctgaccagcaatggacaggagttcaacaccctggtgggacaacagcagatc
tctggaaacctggactcaccagagggaggctttgatgccatcatgcaagtggctgtctgt
ggtgagcacattggctggaggaacgtcacccgtctgctggtgttttccactgatgctggc
ttccactttgctggagatgggaaactgggagggattgttctgcccaacgatgggaaatgc
cacctggagaacaacatgtacaccatgagccactactatgactacccctccatcgcccat
ctggttcagaaactaagtgacaacaacatccagacaatctttgccatcacagaggagttc
cagcctgtttacaaggagttgaagaatctcattcctaagtctgcagtggggacactctct
gcaaactccagcaacgttatcaaccttattattgatgcctacaattctctttcctcagag
gtgattctggagaacagtaagctagcagagggagttaccatcacgtaccagtcacgctgc
aagaatggagtgactggtgagggagagatgggaagaaaatgttctaacatctccattgga
gacgaggtgtctttcaacataagcatcacagctaagcagtgtcctaagatgggcaaacca
gagaccatcaagatcaaaccccttgggttcacagaggaggtggagatcgctctgaacttc
atctgtgaatgtgactgtcacaaaaacggcactgagaacagtgaaatctgccacaacggc
aacgggacatatgaatgtggagcctgcaggtgcaacgagggccgtataggtagacattgt
gagtgcagcaccaacgaagtgaccagtgaagacctggataagaactgtcgtaaagacaat
ggtacagacatctgcagcaacaatggagactgtgtgtgtggatcctgcgagtgtaagaag
agggagaacccagaggaacgctacagtggaaagttctgcgattgtgacaactttaactgt
gaccgctccaacaacaaactctgtggaggacatggtcgttgtgagtgcagggtgtgtatc
tgtgatgccaactggacgggcagtgcctgtgactgttctctggacaccacaacctgcctg
gcctctaacaagcagatctgtaatggccggggcacctgtgagtgtggcacctgcaagtgc
actgaccccaagttccaggggcctacctgtgagatctgtcccacctgtccaggagtctgc
gcagaacacaaggagtgtgttcagtgcagggcctttgggacgggggaaaagaaggagacg
tgtgagagggactgtagctacttcaacctgattaaggtgaaggaccgagacaagctgccc
cagccaggacaggccttccccctgatgcactgtaaggagagggatgccaatgactgctgg
ttctactacacctacgctgtcaacaacaacacagagaaggaggtccatgtggtggaaaca
ctagactgccctgcgggcccggacatcatccccatcgtggctggcgttgtagcgggcatt
gtgctgatcggcctggctttgctgctcatttggaagctgctcatgatcatccacgacagg
agggagttcgccaagtttgaaaaggagaagatgaatgctaaatgggacacgcaagagaat
cctatatataagagccctattaataagttccagaatccaatctatggacgtaaagctgcg
gttctataa
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