Salmo salar (Atlantic salmon): 106599684
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Entry
106599684 CDS
T04363
Symbol
ss18
Name
(RefSeq) SS18, nBAF chromatin remodeling complex subunit
KO
K15623
protein SSXT
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106599684 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106599684 (ss18)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106599684 (ss18)
GBAF(ncBAF) complex
106599684 (ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
106599684
NCBI-ProteinID:
XP_014046450
UniProt:
A0A1S3R260
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Position
ssa03:complement(27718158..27740692)
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AA seq
416 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAKCDSPTPPEVKLEPPTQNMPMGPGGMNQSGAPGPQPPHGHNMP
SEGMVSGGPTAPHMQNQMNGQMPGPNHMPMQGPGPGPNQPPNMPGSGAMNMPPSSHGSMG
GYNHAVPSSQGIPAQGQMNMTQGQGPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPG
GGGQHYQGQQNPMGMMGQVNPGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAG
QGASEERDPAANQQSPYEKDHGNAQYGQQQEAYQQGPPQQQGYPPQQQYPGQQGYPGQQQ
GYGPSQGAPGQYPQGYPQGQGQQYGAYRGPQPGPPQAQQQRPYPGYDQGQYGNYQQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcacagacaacgtggaaagggtgatataacacccgctgga
attcaaaagttactggatgagaacaatcagctgattcaatgtataatggatttccagagc
aaaggaaagaccgcagaatgttcacagtaccaacaaatgctccacagaaatttggtttac
ctggccacgatagcagactccaatcagaacatgcagtctctgctccctgctaagtgtgac
tcccctactcctccagaggtaaagcttgaaccacccactcagaacatgcccatgggccct
ggtgggatgaaccagagtggagcacctggcccccagcccccccacggacacaacatgccc
tcggagggcatggtcagcggcggccccactgccccacacatgcagaaccagatgaacgga
cagatgcctgggcccaatcacatgcccatgcagggccccgggcctggccccaaccagcct
cccaacatgcctggcagtggtgccatgaacatgccccctagcagccacggctccatgggc
ggctacaaccacgctgtgccctcgtctcagggcatacctgcccagggccagatgaacatg
acgcagggacagggacccatgggcaactacggaccccggcccaacatgaacatgcagcct
aaccaaggccccatgatgcaccagcagcctccctcccagcagtacaacatgccccctggg
ggtggcgggcagcactaccagggccagcagaatccaatgggcatgatgggtcaggtcaac
ccaggcaaccatgtcatggggcagaggcccatgcccccttacagacccccacagcaagga
ccccctcagcagtacccagggcaggaagactactatggggaccagtacagtcacgcagga
cagggagcttcagaagagcgagacccagcagccaaccaacagtccccctatgaaaaagat
catggaaacgcccagtatggccagcagcaggaggcctaccagcaaggtcctcctcaacag
cagggctaccccccacagcagcagtaccccggccagcagggctatcctggacagcaacag
ggttatggtccgtcccagggagctccaggccagtacccccagggttacccccagggccag
gggcagcagtacggggcctaccggggcccccagcccggcccccctcaggcccagcaacaa
cgcccatacccaggctacgaccagggtcaatatggaaattaccagcaatga
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