Salmo salar (Atlantic salmon): 106602603
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Entry
106602603 CDS
T04363
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54-like
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106602603
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
106602603
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
106602603
NCBI-ProteinID:
XP_014050815
UniProt:
A0A1S3RER4
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Position
ssa04:15680429..15686883
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AA seq
522 aa
AA seq
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MADQNETSPKVEFGNELLNPSELFETRTRSHKIPVRGQKDFIPTGSDQQRDRLQQSLDEH
WNLVSEERVERLGNLVKAVWISSDMIVELQSPAGKFWQTMGFSAHGKQCLHPEEALYLME
CGNLQVFYQDLPLSIQEGYERFLYSKTMSIQHYQVFGHLKRLGYVVNRFDPSSVPSQYER
QLNLPQSRDTSGRLPKRKRSHSPTSRHTGTQEGPTSKRMEEEKDCNREEEDKNPDSLPDL
SAPDIDEIQTASHVDPTTSTEGGQGRSWWSKEGSPDPDSDLPGQPQSSPRWDFSCIPFPD
LGSRRWLPSSLTSPDPCLLPGAVGSVGACDVAPWLQRLNLREVRMSRREWERERDRDRYR
RDINQDREVQRCRNWAEYQELQERRIQRSRRDRPAHLWEGPVTPLHDPAQVTSTGELLDK
ISVIKSTRLLEGASSLKGSEEWRICFNIYQPDTVAEFKKSAPGKPYSRMCVCSFDGPVPD
LWTLKLLAFQSGDIPVTYAVVDHGDISFYSFKDFQIPTDASF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaaacgaaacatcacctaaagtagaattcggcaatgaattactaaaccca
tctgagctgttcgaaacccgcacgcgcagccacaagatcccggtgcgcgggcagaaggat
ttcattcccactgggtcggatcagcaaagggataggcttcagcagagtttggacgagcac
tggaatctagtatctgaggagcgagtggagaggttagggaacctggtgaaggcagtgtgg
atttccagtgacatgatagtggagctgcagtcaccagcagggaagttttggcagactatg
gggttttctgcccatggtaagcaatgtctacatccagaagaggctctctatctaatggag
tgtggaaacctgcaagtgttctaccaagacctgccactgtccatccaagagggctatgag
agatttctatactcaaagacaatgagtatacagcattaccaggtttttggccatttgaag
cgacttggctatgtggtgaacagatttgatcccagttctgtgccatcgcagtatgagagg
cagttgaacctgccccagtcccgagacacatcaggaagacttccgaagaggaaacgcagc
cacagccccacctccaggcacacaggaacacaggagggccccacttctaagagaatggag
gaggagaaagactgtaacagagaggaagaagacaagaatcctgactctcttccagatctt
tcagccccagacattgacgaaatacagacagcatcacacgttgaccccaccacttcaacc
gagggtggccagggcaggagctggtggtcaaaggaaggctccccagaccctgactctgac
ctgccaggtcagccccagagctcccctcgctgggacttcagctgcatccccttcccagac
ctgggctccagacgctggctccccagcagcctgacttccccagacccctgcctgctgccc
ggggctgtggggtcagtgggggcctgcgatgtggccccctggctgcagaggctcaacctg
cgggaggtgaggatgtcccggcgtgagtgggagagggagcgggacagggaccggtaccgt
agggacatcaaccaggacagagaggtacaacgttgcaggaactgggcggagtaccaggag
ctacaggagagaaggattcaacggagccgcagagataggccagcacacctgtgggagggg
ccggtcacacccctacatgaccctgcacaggtcacttcaactggtgagctgctggataaa
atcagtgtgatcaaatccacacggctgctggagggagcatccagtttgaaaggttcagag
gagtggagaatctgtttcaacatttaccaacccgacacggtcgctgaattcaagaagagc
gctcccggaaaaccctattctcgcatgtgtgtgtgcagttttgatggtccagtgcctgac
ttgtggacactgaaattgctggctttccagagtggggacatcccggtcacctatgcagtg
gtggaccatggggacatctccttctactcctttaaggacttccagatacccacagacgcg
tccttctga
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