KEGG   Salmo salar (Atlantic salmon): 106603393
Entry
106603393         CDS       T04363                                 
Name
(RefSeq) short transient receptor potential channel 2-like
  KO
K10803  DNA-repair protein XRCC1
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106603393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106603393
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     106603393
SSDB
Motif
Pfam: XRCC1_N zf-C2HC_2
Other DBs
NCBI-GeneID: 106603393
NCBI-ProteinID: XP_014052496
UniProt: A0A1S3RJQ8
LinkDB
Position
ssa04:complement(46266053..46270610)
AA seq 448 aa
MAPVKIKHVVSFTSQDPKNGVENLCVVGGDSRSWLCNPQDRSGVLRAELQLERASYFGYI
DVGNCGSAFIQIDVGRSSWPLDQPYITLLPTATLMSPAESRQGTGLTGVRMFKKGDFLSE
GAEDSWDRVRVTCTQPFNKRSQFGLSFLRIRSPLEESEEGSTQTGKESQGQTTPDKSASG
VREWLSSPAVQRTFFGGTKGEGVVLSRTARMVLTASQAARRSLPLPLPSTSLSPSHTSSS
GTQNTATSTPPTAKPDATTHIPNQGKPGAHTATPNKGKPVGNMGNIHPHTASMACLSTVR
SSKENTSQRHQKRKPNSKSRQNQLNGTTCSKQGKPAVGKRPIATLQHTATAPHPQDTGDL
ETTCPICGVFFTAEYLPLHAASCQRLETRKLPGGIVTPVPRPFPVSPASPEESMVPCPLC
SFRFPLSHIQMHASTCGDPVDPHVIWVD
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggccccagtgaaaattaaacacgtcgtttcattcacgtcacaggaccccaagaacggt
gtggagaacctgtgtgttgtgggtggagacagcaggtcgtggctgtgcaacccccaggac
cgaagtggagtcctcagagcagaactgcagctggagcgagcctcatactttggatacatc
gatgtggggaactgtggatctgcgttcattcagattgatgtcggccggtcctcttggccc
ctggaccagccctatatcaccctgttgccaacagcaacactgatgagtccagcagaatcc
cgacagggcactgggctgacaggagtgagaatgttcaagaaaggtgatttcctgtcagaa
ggtgcagaggacagctgggaccgggtgagagtaacctgcactcagccttttaacaagcgc
tctcagtttggcctgtccttcctgcgcatccgcagccccctggaggagagcgaggagggc
tccacacagactggcaaagagagccagggtcagacaaccccagataaatcggcatcaggc
gtgagagaatggctgtccagccctgctgtgcagagaaccttctttgggggaacgaaaggg
gagggtgtggttctgagccggacagctcgtatggtcctcacagcgtcccaggctgccagg
cgttcccttccccttccccttccttccacttccttgtctcccagtcacacatcatcctct
ggcactcagaatacagcaacctctacccctcccacagccaagccagatgcaactacccat
atccccaaccagggaaagccaggggctcatacagctacacccaacaaaggcaagccagtt
ggaaatatgggaaatatacaccctcacacagcttcaatggcttgtttaagcacagttcgc
agctccaaggaaaatacttctcaaagacaccagaagagaaaaccaaactccaaaagcagg
cagaaccagctgaatggcaccacctgtagtaagcagggaaaacctgcagtcggtaagagg
cctatagctacgctacaacacactgccacagcccctcatcctcaggacactggtgacctt
gagaccacatgcccaatatgcggagtgttctttactgcagagtacctgccgctccacgcc
gcctcctgccagcgtttggagaccaggaagctccctggggggattgtgacccctgttccc
cgccccttccctgtctctcctgccagcccagaggagtccatggtgccctgccctctctgc
tccttcaggttccctctgtcccacatccagatgcatgccagcacctgtggagaccccgtg
gacccccatgttatctgggtggactag

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