Salmo salar (Atlantic salmon): 106605251
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Entry
106605251 CDS
T04363
Name
(RefSeq) PHD finger protein 1-like
KO
K11467
PHD finger protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106605251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106605251
03036 Chromosome and associated proteins [BR:
sasa03036
]
106605251
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
106605251
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106605251
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
ASH2L-like_WH
DUF4537
Motif
Other DBs
NCBI-GeneID:
106605251
NCBI-ProteinID:
XP_014056168
UniProt:
A0A1S3RV53
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Position
ssa05:55658249..55669657
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AA seq
527 aa
AA seq
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MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFSVGVEE
VCCVCDAPPLKEPLINCLKCRHGYHPECHTPSIEPEADSNSWICRQCVFAVATKRGGAIK
RGRFARLMQIMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYEFQCSVCANGPETIQRLPMSWVDLAHLVLYHLSLCCKRKYFD
FDHEIMSFANENWDSLLLGSLSDTPRQDRCHNLLNALNSNKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLITDPPINITQRRSPLSLPCQRRAVGPESRKSKRRIMETQPCPPPVP
ATPIDLVPCCHGYVGGTNLYNSRKEEELNLGSPPKRMFALYHPTYNGAPAISRTLHHYSA
EDPCRVPPPCLPFSLSSSHHHHHNHNNHNHHHQQHHQHQPGQKLDPCPSLMLRDVPSYPG
GVGGGGGGDGSAARGWGGGDGVRILARRVTPDGKVQYLVEWGNVSVY
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtaagtgaaggggatgatgtgttagctcgatggagtgatggactactgtac
ctcggcaatgtgaaaagagtagatggagtcaagcaatgttgtctggtgagatttgaggac
aactcggaattctgggtcctaagaaaagacattcactctttctcagttggagtggaagaa
gtttgctgtgtctgtgatgccccgcctcttaaagaacctctcatcaattgtcttaaatgt
cgtcacggttatcatcctgagtgccacactccgtccattgagccggaagctgacagcaat
tcttggatatgtcggcaatgtgtctttgcagtggcaaccaagagagggggagccatcaaa
cgaggacggtttgcccggctcatgcaaatcatgaaacttcggctgccctatcagctgtca
tctttagactgggacccacagcatctgaccaaccagcagcagtgttactgctactgtgcc
ggacctggagagtggaacttgaaaatgttgcagtgtggaagttgtggtcagtggtttcat
gaagcttgcacacagtgtctgaccaagccgttgttatatggggacaggttttatgagttc
cagtgctcagtctgtgcaaacggaccagagacaattcaacggctacccatgagctgggta
gatttggcccatttggtactctaccacctctccttgtgctgcaagagaaaatactttgat
ttcgaccatgaaatcatgtcgtttgccaatgagaattgggactctttgcttctaggctcg
ctctctgacacaccaaggcaagatcgctgtcacaatctgctcaacgctttgaactctaac
aaagacaggtttgtctctggtaaagagatcaagaagaagaagtgtctttttgggctccag
gtccgagctccgcctcccctgacctctgattcgtcccccctcatcactgacccgcccatc
aacatcacccaaaggagaagcccattgtcactgccctgccagaggagagcagtggggcca
gagtcacgcaaatcaaagcggcgcatcatggagacacagccttgtccgcccccggtccca
gccaccccaatagatctggtgccatgttgccatggctacgtaggtggaactaacctctac
aactccaggaaggaggaggagctgaatttgggctctccacctaagaggatgtttgccctg
tatcaccccacctataacggagccccagccatctccagaaccctgcatcactatagtgcg
gaagacccttgtcgagtgccgcccccctgcctccccttctccctgtcatcctcccaccat
caccaccacaaccacaacaaccacaaccaccaccaccagcagcaccaccagcaccagcct
ggccagaagttggatccctgcccctccctcatgctgcgtgacgtcccttcctatccgggc
ggcgtggggggagggggcgggggggatgggtcagctgccaggggctgggggggcggggac
ggggtgaggattttggcgaggcgagtaacgccagacgggaaggtccagtaccttgtggag
tgggggaacgtgagtgtgtactga
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