KEGG   Salmo salar (Atlantic salmon): 106605362
Entry
106605362         CDS       T04363                                 
Name
(RefSeq) collagen alpha-2(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04510  Focal adhesion
sasa04512  ECM-receptor interaction
sasa04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106605362
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106605362
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106605362
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:sasa00535]
    106605362
Proteoglycans [BR:sasa00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   106605362
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 106605362
NCBI-ProteinID: XP_014056362
UniProt: A0A1S3RWU4
LinkDB
Position
ssa05:58154465..58165644
AA seq 657 aa
MGAPRVKASVISQLLVLLLCILPSHAQDEYSGYHSGDEHTYEGSLVDNYEHSGYPQPEEY
PPEPTHSYEEQQPSSGYDPYAPAPTSVSMITEDSYPYTTTTQVPYEQEPYEESLQVPGGG
EASLGEEGPTDCNCEPGEPGFAGFAGPKGARGLQGRDGFPGAQGREGYKGFKGVLGRGGD
TGPEGDSGPDGEDGASGFSGAQGLPGLPGDPGETGVLGLKGDIGMEGPRGGVGVTGETGP
IGEAGPGGPDGTGGIKGSTGAEGKQGPEGTEGEKGQIGAPGFSGDHGEMGYNGYPGEPGG
RGETGHKGDQGPGGMPGSDGEPGEDGPLGVPGVIGFPGEFGQKGARGDRGVRGPPGRVGA
GGHQGARGDAGVPGKPGPKGLQAQPGAKGETGPDGEKGGVGRTGVKGKKEDKGSFGERGD
KGQQGERGTIGPDGIVGRNGPPGIPGSRGEPGPGGDLGVKGGSGPKGVPGAPGPGLTDEQ
VLQLCKGVVIAQISQYAASIRAKCSQGCPINNRTLIGPPGTRGPTGESGKPGKAGKAGVK
GGRGIQGDTGVDGQKGAEGERGTKGLKGKGGEPGKGLPGHDGHQGLRGLPGHPAEPKNGM
AGPRGPRGFTGALGQPGMAGNAGVPGFCEARDCSIHAPVMRKEQGLVKGPRDLSPKI
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgggagcccccagggtgaaggcgtccgttatctcgcagctgctcgtgctcctattgtgt
atcctcccctcccacgcgcaggacgagtactctggttaccactcaggtgatgaacacacc
tatgagggctccttggtcgacaactatgaacattcaggatacccacaaccagaggaatac
ccaccggagcccactcacagctatgaggagcagcaaccctcatctggatatgacccctat
gcaccagcccccaccagtgtgagcatgatcacagaggactcctacccctacaccaccacc
acacaggtaccatacgagcaggagccctacgaagagtcgctccaggtccctggtggtggg
gaggcttctctgggggaggaggggccaacagactgtaactgtgagcctggagagccaggg
ttcgctgggtttgcagggcccaagggagccagaggactgcaaggtagagatggcttccct
ggggctcagggaagggaggggtacaaaggattcaaaggagttctaggaagaggaggagac
acagggcctgagggtgactctgggcctgatggggaggacggtgcctctggtttctctgga
gcccagggcttgcctggtcttcctggagatccaggtgagacaggggtgctaggactgaag
ggtgacatcggtatggaggggccacgcggaggagtgggggtaacgggtgagactggtcca
attggtgaggcagggcctggtggtcctgatggaactggaggtatcaagggatcaactgga
gcagaagggaaacagggtcctgagggaacagaaggggaaaagggtcagattggagcacct
ggattctcaggagaccatggggagatgggctacaatgggtatcctggagagccaggaggc
agaggagagaccggtcacaagggtgaccaaggcccagggggcatgccaggcagtgatggg
gagcctggagaggatggtcctcttggagttcctggggtgatcggctttcctggagagttt
ggacaaaagggcgcgagaggggatcgtggtgtgaggggacctcctgggagagtaggagct
ggggggcatcaaggagcgagaggagatgcaggagttccagggaaaccaggacctaaaggc
ctgcaggcccagcctggagccaaaggggagacaggacctgatggtgagaagggtggtgtt
ggaagaactggtgtgaagggaaagaaagaggacaagggaagctttggagagcgtggtgac
aaaggacagcaaggagagagaggtaccatcggccctgatggcattgttggacgaaatgga
ccccccggcatcccaggctccagaggagagccaggtccaggcggtgacctgggagtcaaa
ggtggctctggacctaaaggagtgccaggtgcccctggccctgggctgacagatgagcag
gtattgcagctgtgtaaaggagtggtgatagcccagatctcccagtatgcagcttccatc
cgggccaagtgttcccaaggctgccccatcaacaaccgcacacttattgggccacccgga
accaggggaccaactggagaatcaggcaaacccggtaaagcgggcaaagctggagtcaaa
ggaggcaggggcatccaaggggacacaggagtggatggtcagaagggggcagagggtgaa
agaggaacaaaaggtctgaaaggaaaggggggtgagcctggtaaaggtctaccaggacac
gatgggcatcaaggtctcagagggctgccaggccacccagcagagccaaagaacggtatg
gcaggtcccagagggccccgtggtttcacaggcgctttgggccagcctggcatggcaggc
aacgcaggagtgcccggcttctgtgaggcacgggactgcagcattcacgcgcctgtgatg
cgcaaggagcagggcctagtgaagggaccccgcgatctaagccccaagatttaa

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