Salmo salar (Atlantic salmon): 106611798
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Entry
106611798 CDS
T04363
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106611798
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
106611798
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
DUF7645
Motif
Other DBs
NCBI-GeneID:
106611798
NCBI-ProteinID:
XP_014067859
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All DBs
Position
ssa09:complement(63499963..63503562)
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AA seq
274 aa
AA seq
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MYVGYLLDKEGSMYHQGPVRRSGINIPPQNFVSTPQYSDFTGYHHVPNMDTHTQSSGAWG
APYVAPREDWGAYSLGPPNTNPTPMNNSSPGQVSYCSPEYNPMHAPGSAVLQPPTDNISV
AQLSPDRERRNSSYQWMSKTVQSSSTGEKGKTRTKEKYRVVYTDHQRLELEKEFHFNRYI
TIRRKSELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDGSGGSVHSDPGSVSPLPVP
GSLSPSDIHGSLYPPPGMNNLPSIRNIQQVTVTQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgggatacctcttggataaagaaggcagcatgtatcaccaaggacctgtaaga
cgatcgggaatcaacatcccaccacagaactttgtttccacgccacaatattccgacttt
actggataccatcatgtgccaaacatggatactcatacacagtcttcgggggcttgggga
gctccttatgtcgcaccgagggaggactggggcgcctatagtctggggcctcctaacact
aatcctacgcccatgaacaactcctcgccgggacaagtttcctattgctcacctgaatac
aatcccatgcacgcgccagggtcagcagtattgcaaccacctacagataatatttctgtt
gctcaactttccccggatagagaaaggcgcaattcttcttaccagtggatgagcaaaacg
gtacaatcatcttctaccggtgagaaaggcaaaacaagaacgaaggagaaatacagagtg
gtttacaccgatcaccagagactggaactggagaaggaattccattttaatcgttacatc
actatcagaagaaagtcagaacttgcggggaaccttggcctttcagaacgacaggtgaag
atctggtttcaaaatcgcagagccaaggagaggaaattaatcaaaaagaaaatgggatct
gatggcagtggaggatcagtgcacagtgacccgggttcagtgagtcctctgcccgtacca
ggctcactcagtccgtcggatattcacggctctctctacccaccccccggaatgaacaac
ttgccatctattaggaacatacagcaggttactgtcactcagtag
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