KEGG   Sphaerochaeta associata: MUG09_16400
Entry
MUG09_16400       CDS       T08141                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
sass  Sphaerochaeta associata
Pathway
sass03030  DNA replication
sass03430  Mismatch repair
sass03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sass00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MUG09_16400 (dnaX)
   03430 Mismatch repair
    MUG09_16400 (dnaX)
   03440 Homologous recombination
    MUG09_16400 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sass03032]
    MUG09_16400 (dnaX)
   03400 DNA repair and recombination proteins [BR:sass03400]
    MUG09_16400 (dnaX)
Enzymes [BR:sass01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MUG09_16400 (dnaX)
DNA replication proteins [BR:sass03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MUG09_16400 (dnaX)
DNA repair and recombination proteins [BR:sass03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MUG09_16400 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA DNAX_ATPase_lid RuvB_N AAA_5 AAA_30 AAA_22 TIP49 AAA_16 AAA_14 AAA_2 ResIII AAA_19 AAA_24 DUF815 nSTAND3 AAA_18 RNA_helicase Glyco_tranf_2_5 VapE-like_dom
Other DBs
NCBI-ProteinID: UOM51133
LinkDB
Position
3527625..3529253
AA seq 542 aa
MAYEVTATRKRPQVFDNLVGQEFVVSTIKHAIEQGRIAHAYLFSGPRGVGKTSSARILAR
ALNCEQGPTATPCGVCSNCREITQGNNVDVIEIDGASNTSVNDIRQIKDEVLFPPQASKY
KIYIIDEVHMLSTSAFNALLKTIEEPPAYIVFIFATTELQKVPATIRSRCQQFHFQLIDL
DLIKSCLSEAASEMEVQADDDALFWIAKESTGSMRDAYTLFDQVVSFSQGHITMEKISSK
LGLVGIDQIVDIVSRLLDNKTQEALHAVQALLFAGVSVEQCIKDFTQFFRSLLFIKAGVV
EDAILGIQSDRIPLSLRNAYTTEQLEAALELFLKLYRDIRYSLNPRFELELAVSRLAGLP
HIASPTALVRKIAQLREELLSGSVKLPARKLEVQPDLIATQAVVEPKSKAEASSSVAAIP
VVVPVSPPPVKQEAVARDFSRQDLPLLVSKLSSAPLLSQVAQAITQVRSEAGSLFLTFST
SFCQNKAQEHETRFRDLIAEITGFKGPVHFLCVEEVKQETPTVDDPVISKIASVFRGEVK
HQ
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggcatatgaagtaacagcaaccaggaaacgtccccaggttttcgataatcttgtgggt
caggagttcgtggtttccaccatcaaacatgcaatcgagcagggaaggattgcccatgcc
tacctgttcagcggtcccaggggagtcggaaaaacatcgtccgcccgaattctggcacgt
gcactgaactgcgagcagggcccgacggcaactccctgcggcgtgtgttcaaattgcagg
gagatcacccagggcaacaatgtcgatgtcatcgagatcgacggtgcgagcaacaccagc
gtaaacgacatccgccaaatcaaggatgaagtactcttccccccacaggcaagcaagtac
aagatctacatcatcgacgaagtgcacatgctctccaccagtgccttcaacgcactgctc
aagaccatcgaggaacccccggcgtacatcgtattcatctttgccaccaccgagctgcag
aaggtcccggcaaccatacgttcacgctgccagcagttccatttccaactcatcgacctc
gacctcatcaagagttgcctcagcgaggctgcatcagagatggaggtgcaggcggacgac
gatgcactcttctggattgcgaaggagtcgacaggctccatgcgtgatgcctacaccctc
ttcgaccaggtcgtctctttctcccagggccatatcaccatggagaaaatcagcagcaag
ctggggttggtcggcatcgaccagattgtcgatatcgtcagccgcttgttggacaacaag
acccaggaagccctgcatgccgtccaggctctcctgttcgccggggtctccgttgaacag
tgcatcaaggacttcacgcagttcttcagaagcctgctcttcatcaaggcgggggtggtt
gaggatgccattttgggcatccagtccgacaggatccccctctcactgagaaatgcctat
accactgaacagctggaagctgcattggagttgttcctcaagctctatcgtgacatccgc
tattcactaaacccccgattcgaactggaactagccgtctcacgccttgccggccttccc
catattgccagtccgaccgccttggtcaggaaaatcgcccagcttcgcgaggaactgctc
agcggcagtgtaaaacttcctgctcgcaagcttgaagtccaacccgacctcatcgccacc
caggcagtcgtcgagcccaagagtaaggcagaggcatcttccagcgttgctgcgatacct
gttgttgttcccgtttctccacctccggtaaagcaggaagcagtggcaagagacttcagc
aggcaggacctgcctcttttggtaagcaagctgtccagtgcaccgctgctctcccaggtt
gcacaggcgattacacaggtccgaagcgaagcgggttctttatttctcacattctccacc
tcgttctgtcagaacaaggcacaggaacatgaaaccagattccgagacctcatcgccgaa
atcacaggcttcaaaggcccggtacactttttgtgtgttgaggaagtaaaacaagagaca
cccacagtcgacgatccggtaatctcaaagattgcttcggtcttccgtggggaggtcaag
caccaataa

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