KEGG   Syntrophus aciditrophicus: SYN_02979
Entry
SYN_02979         CDS       T00346                                 
Name
(GenBank) hydrolase
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
sat  Syntrophus aciditrophicus
Pathway
sat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SYN_02979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sat03019]
    SYN_02979
Messenger RNA biogenesis [BR:sat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SYN_02979
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd Activator-TraM KH_KhpA-B KH-I_KHDC4-BBP KH_NusA_2nd KH_2 ATPase_gene1 PetM
Other DBs
NCBI-ProteinID: ABC76610
UniProt: Q2LRA0
LinkDB
Position
733879..735444
AA seq 521 aa
MLNYTVIAFIMLGLIAIGLAIGYFLKFRLSQKRLESSENLALRIIDEAKKEAETIKKEAV
LQTKENLLKLKAEFEKETRERKLDLDNLERRIRSKEENLDKRIDSMSQKENAIEVREKNL
LSKEMQLNEKHDKLSRMIGEQKEKLEQIADITSEEAKDFLIRSMEAAAKRDAAMLIRKIE
EDAKREADKKSREIIAYAVQRYAGDYVAENTVSVVNLPNDEMKGRIIGREGRNIRAIEAA
TGIDLIVDDTPEAVVLSSFDPIRREVAKISLERLITDGRIHPGRIEDIVKKVRLEVDSII
KETGERVSFDVGVHDIHPELINLLGSLKYRTSYSQNVLQHSIDVAHLTGMMAAELKMNIK
EAKRAGLLHDIGKAVDHKIEGTHAAIGADYAKRFGESQRIVQAIAAHHDDGRTNTLLGVL
VQAADTLSAARPGARREMLETYVKRLEELENIANSFNGVDKCFAIQAGREIRILVGSEKL
SDNDAMMLCKDIVKKIESELTYPGQIKVTVIRETRVSDFAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
ttgctgaattatactgtaatagcgtttatcatgttaggattaattgccattgggttggca
atcggttattttttgaaattcagactttctcagaaacgattggaatcttctgagaacctt
gcgttgaggattattgatgaagccaaaaaagaggctgaaaccataaaaaaagaggctgtg
cttcagacaaaagagaatctgctgaaactgaaggcggaattcgagaaggaaacgagagaa
agaaagctggatctggataatttagagcggagaattcgctcaaaggaagaaaatctcgat
aaacgaattgattcaatgtctcagaaagagaatgcaatcgaagttcgagaaaagaatttg
ctgtccaaagaaatgcagctcaatgagaagcacgataagttaagcagaatgattggggaa
cagaaagaaaaactggagcagattgccgacataacttcggaagaggcaaaagatttttta
atccggtctatggaagctgctgcgaagcgtgatgctgccatgctgattagaaaaatcgaa
gaagatgcaaagagggaggcagacaagaagtcgagagaaattattgcttatgctgtgcaa
cgttatgccggtgactatgttgcggaaaacactgtttctgtagtcaatcttccaaacgat
gaaatgaaggggcgtatcattgggcgggaaggtcgcaatatcagagcgatagaggcagcc
actggaattgatcttattgttgacgataccccggaagccgtagttttgtccagttttgat
cctatacggcgagaggtggcaaaaatttcactggaaagattgattacggatggaaggatt
catcctggcagaattgaagatattgtaaagaaggtgcggttggaagttgatagtattata
aaggaaacaggggaaagggtttcctttgacgtaggagtgcatgatattcatccagaactc
attaacctcctgggcagtttgaaatatcggacaagctattctcagaatgttctccagcat
tccattgatgtcgctcatctgacgggtatgatggcggcggaattgaagatgaatataaag
gaggcaaaacgtgcggggctgcttcacgatatcggtaaagcggttgatcataaaatagag
gggactcatgcggcaatcggggctgattacgcgaaacgttttggagaatcgcaaaggatt
gttcaggccatcgccgcccaccatgacgatggcagaacgaacacgcttcttggtgtcttg
gttcaggcagcagacaccttgtctgctgcaagaccaggagcccgaagggaaatgctggaa
acctatgtaaaacgattagaggaattggaaaatatagctaattcattcaacggcgtcgat
aagtgttttgccatccaggccggcagagaaatccggatccttgtcggaagtgaaaaactt
tcggacaacgatgcgatgatgctttgcaaggatatcgtcaaaaagatcgagtcggaattg
acatatccgggccagattaaggtaacagtgattagagaaacgcgagtatcggatttcgca
aaatag

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