Streptomyces atratus: C5746_29735
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Entry
C5746_29735 CDS
T07374
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sata
Streptomyces atratus
Pathway
sata03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C5746_29735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sata03400
]
C5746_29735
Enzymes [BR:
sata01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C5746_29735
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C5746_29735
DNA repair and recombination proteins [BR:
sata03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C5746_29735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AXE80449
UniProt:
A0A2Z5JJP4
LinkDB
All DBs
Position
6489437..6490300
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AA seq
287 aa
AA seq
DB search
MPELPEVEVVRRGLERWVTGRTVGDVEVLHPRAVRRHLAGGVDFAARLGGARFGTAMRRG
KYLWVPLNDESSSLLGHLGMSGQLLVQPQDTPDEKHLRIRIRFDDSLGTELRFVDQRTFG
GLSLHECAADSTDGLPDTIAHIARDPLDPAFDDAAFHTALRLRRTTIKRALLDQSLISGV
GNIYADEALWRTKLHYDRPTATLTRPKSAELLGHVRDVMNAALDQGGTSFDSLYVNVNGE
SGYFDRSLDAYGREGEPCHRCGTPMRRRPWMNRSSYFCPRCQRPPRP
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaagtcgtacgacgcggtcttgagcgctgggtcaccggc
cgcacggtcggcgacgtcgaggtgctgcacccgcgtgcggtccgccgccatctcgcgggc
ggcgtggacttcgcggcccggctcggcggcgcccgcttcggaacggccatgcgccgcggc
aagtacctctgggtgccgctgaacgatgagtccagctcactgctgggccatctcggcatg
agcggccagctgctcgtacagccgcaggacacccccgacgagaagcatctgcgcatcagg
atccgcttcgacgactcgctcggcaccgagctgcgcttcgtcgaccagcggaccttcggc
gggctctctctccacgaatgcgccgccgacagcacggacgggctgcccgacaccatcgca
cacatcgcccgcgaccccttggacccggccttcgacgacgcggcgttccacacggccctg
cgactgcgccgtacgacgatcaaacgcgccctgctcgaccagtcgctgatcagcggggtc
ggcaacatctacgcggacgaggcgctctggcgcaccaagctgcactacgaccggccgacc
gcgaccctcacccgccccaagtcggccgaactgctgggccatgtccgcgacgtgatgaac
gcggcgctcgaccagggcggcaccagcttcgacagcctctatgtcaatgtgaacggcgag
tccggctacttcgaccgctcgctcgacgcgtacgggcgagagggcgagccctgccaccgc
tgcggtacgccgatgcgccgccgcccgtggatgaaccgctccagctacttctgcccgcgc
tgccagcggccgccgcggccctga
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