Sylvia atricapilla (blackcap): 136359697
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Entry
136359697 CDS
T10263
Name
(RefSeq) macrophage mannose receptor 1-like
KO
K06560
mannose receptor, C type
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
136359697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136359697
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sati04054
]
136359697
04090 CD molecules [BR:
sati04090
]
136359697
04091 Lectins [BR:
sati04091
]
136359697
Membrane trafficking [BR:
sati04131
]
Endocytosis
Phagocytosis
C-lectin receptors
136359697
Pattern recognition receptors [BR:
sati04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
136359697
CD molecules [BR:
sati04090
]
Proteins
136359697
Lectins [BR:
sati04091
]
C-Type lectins
Others
136359697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
CysR_MRC2_N
UL45
Xlink
Ricin_B_lectin
Spa1_C
Motif
Other DBs
NCBI-GeneID:
136359697
NCBI-ProteinID:
XP_066172666
LinkDB
All DBs
Position
1:complement(20166466..20197606)
Genome browser
AA seq
1411 aa
AA seq
DB search
CFTDIKTFLLYNKVNRLCVQASVAQSVRTATCNQDNESQKFRWITDHQLMSVKLKLCLGV
PLKEDQAMVTLYPCNQKSELQWWECRNESLLAIQGEDLFFSPGNEEHDNVLLKEELSAKN
KWNIYGAMDVLCSQGYEETFTLQGNAFGAPCVFPFLFQGRWRAQCTAAGRSDGRLWCATS
ADYDTDQRYGFCPSADVLSHSTWTTDLSTNVLYQINADSALTWHQARKSCQQQNAELLSI
TDLHEQTYLRELTDDIYSALWIGLNRLDLSSGWEWIGGSPFRYLNWAPGSPSPESGKLCV
VLNSEIKAKWQNWECDQKLGYICKKRNFTLVPSGDLGAVTCPDGWVPYVGHCYKIFRDSK
GWEGALTSCQKEGSHLASIQSLEEHNFMVSQLGYKPTDKLWIGLNDRKVQMYFEWSDGTP
VTYTKWHLGEPSTTNNRPEDCVLIKGQNGYWADHVCEKKAGYICKRKGTSRIAGEKEITA
AGCKKGWRRYGTYCYFIGHVPATFSEANTTCEREEGYLVTVESRYEQAYLTSLVGLRPEK
YFWLGLSDVQDQGVFSWANSEVVSFTHWDAGMPGNYRGCVAMRTGTAAGLWSVLDCETKQ
KYICKQWAKGATVPPIPTTALVPMCPEGWVSNNHRSSCLKHFCRSEIRKKSWFEARDFCR
QIGGDLVTINSKEEIPLLIQAIRVNRCTFETVWLGIFSLNPDEGFAWSDGSPVRYTNWDD
SSRNSGLRKFCGSFYYGRYSKQWSLLVCQEQHNWVCQIKQGVSLKPEPIDTYEYKTTADG
WVIYEDKLYYISKEQVSMERAREFCRKNSADLAVVNSNSERRFLKRALKENESYGRQQVG
YFIGLRVSLDKKFSWMDGTPVTYVAWAPNEPNFANNEENCVEMLSEHGLWNDISCSSANK
FICEKHNSSINSTLPSPLPSGGCPESWIFFNNKCFKVFASNITRNLTWHAARDVCFNLGG
NLAAIPNEPAQAFLFYHLKYATANVWIGMNDLNRESTFLWTDGSTVSYTNWASGAPERQQ
SYFDFYKYEQVTDDALETDCVFIMKSDGKWRDDSCDNKRGYVCQMDSLPSQPEVPTTNPA
SGFTRYGDSSYSVISSEMQWEEARKNCQDKSGELASISDAYIHSFLWIQMLKCGKPVWIG
LNSNVTGGYYKWTNNWKTIYTKWAAEEPKENNACVYLDLDGTWKTASCNESYFSVCMISD
EIAPTDSAELPGDCPEADELQAWIPYHDHCYYLEASAGRTWALASLECARLGATLVSVEN
MDESHFLTHRIQPLGNKVGGFWIGLYKNVEGQWLWLDNAVLDFVNWEEKEFSGDHQCVEI
TAPSGYWDKSDCSAEKGFICKKPKVELNGSPRKPKGKEKNEETRPPVHASIWPLIFLAVL
TVFGAGMAAYFYKRKRQNQMSTDSGNETLLK
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
tgttttacagacattaaaacatttttactatataataaagtcaacagactctgtgttcag
gcatctgttgcacagtcagttagaactgccacttgcaatcaagacaatgaatcacaaaaa
ttccggtggatcacagatcatcagcttatgagtgtgaaactgaaactatgcctgggggtg
ccactgaaggaggatcaggccatggtcaccctgtatccctgtaatcaaaaaagtgagctc
cagtggtgggaatgcagaaatgaaagcctccttgcaatccaaggagaagatttatttttc
agtcctggcaatgaagagcacgacaacgttttgttaaaggaggagctgagtgcaaagaat
aaatggaacatctatggggccatggatgttttatgttcccagggatatgaagagaccttc
acgctgcagggaaacgccttcggggcgccgtgtgttttcccgttcctgttccaggggcgg
tggcgggcgcagtgcacggccgcgggccgctccgacggccgcctctggtgcgccaccagc
gccgactacgacacggaccagcgctacggcttctgcccctcggcggatgtcctttcccac
agcacatggactacagatctgtcaacaaatgttctctaccaaataaatgctgactcagca
ctcacatggcaccaagccaggaagagctgtcagcagcaaaacgcagaattactgagtatt
acagaccttcatgaacagacataccttagagaattaacagatgatatatattctgcgctg
tggattggactcaacagactggacttgagtagtggatgggagtggattggaggcagccct
ttccggtacttaaactgggctccaggaagcccgtctccagaatctggaaagctctgtgtg
gttttgaattctgaaataaaagctaaatggcaaaattgggaatgtgatcagaaacttggt
tatatttgtaagaaaaggaactttactttggttccttcaggtgaccttggagctgttact
tgcccagatggatgggtgccctatgtaggtcactgctataagatcttcagggacagcaaa
ggatgggaaggagctctgacctcttgtcagaaggaagggagtcacttggccagcatccaa
agccttgaggagcacaattttatggtgtctcaacttgggtacaagccaacagacaagctg
tggattgggctgaatgaccgtaaggttcaaatgtattttgagtggagtgatggtaccccg
gtgacatacaccaaatggcacctgggagagccatcaactacaaacaacaggccagaagac
tgtgtcctgatcaagggccagaatggatattgggcagaccatgtctgtgagaagaaggcc
ggttacatttgtaaaagaaaaggtacatcaagaatagctggagaaaaagaaattactgct
gcaggttgcaagaaaggctggagaagatatgggacctactgctattttattggacatgtt
ccagcaacattttcagaagcaaacaccacttgtgaaagagaagaaggttacttagtcacc
gttgaaagtaggtatgagcaagcctatctgactagccttgttgggctgaggcctgagaaa
tacttctggcttggcctctctgatgtgcaggaccaaggcgttttcagctgggccaacagt
gaagttgtctccttcacacactgggatgcaggaatgcctggaaattatcgaggttgtgta
gccatgagaactgggactgcagctggattatggagtgttcttgactgtgagacaaagcaa
aaatatatttgcaagcagtgggcaaagggtgcaacagttccacctattccaactactgct
ctggtccccatgtgccctgaaggctgggtatcaaacaaccacagaagttcctgtcttaaa
catttttgcagatcagaaattagaaagaaatcatggtttgaagctcgagatttttgcaga
caaataggaggggatctggtcaccattaacagtaaggaggaaataccattactaatccaa
gcaattagagtcaatcgctgtacgtttgaaacagtttggcttggtatattttccttgaat
ccagatgaaggctttgcctggagcgatggctctccagttaggtacacaaactgggatgat
agttcaagaaattcaggactacgcaagttttgtggttcattctattatgggagatattct
aaacaatggtctcttttggtctgccaagaacagcataactgggtttgtcaaataaaacaa
ggagtgtcattaaaacctgaaccaattgacacatacgaatataaaaccactgcagatgga
tgggtcatatatgaagataagctctactatatcagcaaagaacaggtctccatggaaagg
gcccgagagttttgcaggaagaattctgcagacctagctgttgttaatagtaacagtgag
agaaggttcctaaagagagcactaaaagaaaatgagagctacgggagacagcaagtagga
tatttcattggtctaagagtgagccttgataaaaagttcagctggatggatggaactcca
gtaacctatgtggcctgggctcctaatgaacccaactttgcaaataatgaggaaaattgt
gtggaaatgctgtcagagcatggattgtggaatgacattagctgtagttctgccaataaa
tttatatgtgaaaaacataacagttctattaattcaacattaccttctccgttgccttcc
ggaggatgtccagaaagctggattttttttaacaacaagtgtttcaaagtatttgcttcc
aatataacaagaaatctcacgtggcatgctgcaagagatgtttgctttaatttgggagga
aacctggctgctataccaaatgaaccagcgcaagctttccttttctatcatttgaagtat
gccacagctaatgtttggattgggatgaatgatctcaacagagagtccacatttctctgg
acggatggaagcactgtttcctacaccaactgggcttctggtgcaccagaaaggcaacaa
agctactttgacttttataagtatgaacaagtgacagatgatgctctggagacagattgt
gtcttcatcatgaagtcagatgggaagtggagagacgatagctgtgacaacaaaagaggc
tacgtgtgccagatggattcacttccctcacagcctgaagtaccaacaacaaatccagcc
tctggctttactcgttatggtgacagtagctattcagtcatttcatctgaaatgcaatgg
gaagaggccagaaaaaattgtcaagacaaatctggggaacttgccagcatttcagatgcc
tacatccattcattcttgtggatccagatgctgaaatgtggaaaacctgtatggattggt
cttaacagcaatgtgactggtggctattacaaatggaccaataactggaaaaccatatac
acaaaatgggcagcagaggaaccaaaggagaacaatgcttgtgtttaccttgatcttgat
ggtacttggaaaacagcatcttgcaatgaaagctacttttcagtttgcatgatatcagat
gagatagctcctactgactctgctgagctacctggagactgtcctgaagcagatgaactc
caagcttggatcccttaccatgaccactgctactaccttgaagcatcagctgggagaacc
tgggcactggcctcccttgagtgtgctcgcttaggagctaccttggtttcagtagagaac
atggatgaatctcattttctgactcatagaattcaaccacttggaaataaagtaggaggc
ttttggattggactttacaagaatgtggaaggccagtggttatggctagataatgctgtc
ctggactttgttaactgggaggagaaagagttcagtggggaccatcagtgtgtggaaata
actgcaccatctggctattgggataaaagtgattgctctgctgaaaaaggatttatctgc
aaaaaacccaaagttgagctgaatgggagtcctagaaaaccaaaaggcaaggaaaagaat
gaagagactcgcccgcctgttcatgcctctatttggccactcattttcctggctgtttta
actgtttttggagctggcatggcagcctatttctacaaaagaaaaagacaaaaccaaatg
tcaacagattctggcaatgaaacactattaaaatga
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