Sylvia atricapilla (blackcap): 136364266
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Entry
136364266 CDS
T10263
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136364266 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136364266 (NHLRC1)
Enzymes [BR:
sati01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136364266 (NHLRC1)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136364266 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
Prok-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
136364266
NCBI-ProteinID:
XP_066180167
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All DBs
Position
1:62361946..62363687
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AA seq
385 aa
AA seq
DB search
MAAEDEAELSLLECRVCFEPYGPDGERRPLNLPCGHVLCRGCVGALAGAERQRLECPFCR
RLCGPAETSDCRPLLQLLELLGPAGGRLASGLGRSGGEAAAAPAGLGLRLCLGGWGSLVN
PTGVAACPGSGRLAVAHDGKKRIHVFGPSGVCLRRFGERGDAGNDIKYPLDVTVTSDGHV
VVTDGGDCSVKAFDLEGRGLLAVREGFCLPWGLDATPKNEVILTDSEAGALYRLAADFRR
GELKQCQMIRARLVSPRAVAVCPTSGAVAVIEHLKARGPGKGSTRLTIFSAEMDLIGQMD
SFGLNLVFPSRIHATAVAFDKEGRVIVTDVCSQAVVCLGKPEEFPVFNPLISHGLSYPVG
LTYTANNSLVVLDSGDHSIKVYSST
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggacgaggcggagctgagcctgctggagtgccgggtgtgcttcgagccg
tacggccccgacggggagcggcggccgctcaacctgccctgcgggcacgtcctctgccgg
ggctgcgtgggggccctggccggcgccgagcggcagaggctggagtgtcccttctgccgg
cggctctgcggccccgccgagaccagcgactgccgcccgctgctgcagctgctggagctc
ctgggccccgccggcggccgcctcgcctcgggcctgggcaggagcggcggagaggcggcg
gcggcccccgcggggctcgggctgcggctgtgcctggggggctgggggtctctggtgaac
cccaccggggtggcggcctgccccgggtcgggccgcctggcagtggcacacgacggcaag
aagaggatccacgtcttcgggccgagcggggtctgcctgcggcggttcggggagcggggg
gacgcgggcaatgacatcaagtatccgctcgatgtgacggtcacgtcggacgggcacgtg
gtggtcaccgacggcggggactgctccgtgaaggccttcgatttggagggaagggggctc
ctggctgtccgggaaggcttctgtctgccgtggggcttggatgccacccctaagaacgaa
gtaatcctgaccgactcggaggcgggcgcgctgtaccgcttggcggccgacttccgacgg
ggggaattgaagcagtgtcagatgatccgggcccgcctggtcagccccagagcggttgcg
gtctgcccgacctcgggcgctgtcgcggtcatagagcacctgaaagctcgagggccgggc
aagggcagcacccgcctgacgatattcagcgcggagatggatctcatcggccagatggac
agcttcggtctgaacctggttttcccctccagaatacatgctaccgctgtggcctttgac
aaagaaggtcgtgttatagtaacggatgtttgtagccaggctgtcgtatgcttagggaaa
cctgaggaattcccagtctttaatcctctaatcagccacgggctatcttatcctgttgga
ctgacttacacggcaaacaattccctcgtcgttctagacagcggtgatcattcaataaaa
gtatatagctctacctga
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