Sylvia atricapilla (blackcap): 136366340
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Entry
136366340 CDS
T10263
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
136366340 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sati04040
]
136366340 (CNGB1)
Ion channels [BR:
sati04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
136366340 (CNGB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
136366340
NCBI-ProteinID:
XP_066183419
LinkDB
All DBs
Position
12:6713290..6739531
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AA seq
1362 aa
AA seq
DB search
MMGWIDRVVPQPPVPHVTEETPVQELQPAKAPTGKAGGPTDAADHSPAAIEEKEKKVTFV
VSEDSSSVFDSVGSSVLSWLSYGLEKVIPQPAPAPGLQALGKSFETSVDIAEETEVQVLG
DEDDDGLEITPFDAEEDVSEGEQETSPQQWAGNRVLSWLSQGFERILPQPEGMKKPETEP
KERSEGAAAGTKETKTQAKSKCSVSESTPAAEKAAAAAKGQPEPVTALSPQSVAVDGGRM
FSWFMQGLEKVMPQPVSRERQDTQGVATATSSPVEQIHVAPGKQEETHLILKEISNDQIN
EEMAAWAQMAELQADTHHLPTIQEEPQEEEDRPCLCSPNTARGEEEKEEGEEERMKEEEE
EMKQEEEERKKEEEEMKQEEDERKKEEEEMKQEEDERKKEEEEIKKEEEERKKEEEENGG
NEEEERKQEEEEDRKKEEEVREKEEEDDSKKEEEGRKKEEEERKKEEEERKKEEEERKIE
EEEERKKEEEERKIEEDRKKAEEERKKEEKRKKEEKRKKDKERKKEKEKKKELKRKEDEK
KEDEKKEEEQEESAAPLLQPQCLPADEGVDEACLAEETLRIEQLEEVEIRDLESAFVQVE
EKTAEAAETDAEGHCPTVEIKDVDSPGRAVEIHGSHGALPAAGAPNLLAVPGAASPRRKR
LLPQDGLDKRLVSQSPTQELGWDEEQRESLPERIGSASSLSSTIINTRLQELVRLFKERT
EKVKEKLIDPDVTSDDESPVASPTKPAPAAAPLPAPGGEPEGDKPLEDDHYCEMLCCTFK
HRPWLDRLKSYQFPSSIDPLTNLMYVLWLFFLVMAWNWNCWLIPVRWAFPYQTPANIHYW
LLMDYLCDLIYLLDILIFQTRLQFVRGGDIITDKKAMKENYLRSQRFKMDVLCLLPLDFF
YFKVGVNPLLRFPRCLKYMAFFEFNNRLEAILTKAYIYRVIRTTAYLLYSLHVNSCLYYW
ASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQLLNYFTGVFA
FSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPRTVQNRVKTWYEYTWHSQGML
DESELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCK
KGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAAGGGNRRTANVVAHGF
ANLFILEKKDLNEILVHYPESQKLLRKKAKKMLRSNNKPKDEKGDPLIIPPKADTPKLFK
AVLAARGRTGGQGALGRLRWRLKELKAMQDTQGSSVSPTPPKSPMHQRSPVTSHKAQTRP
GEEIFSESSDHSVTIRVISTAKEDEEILAAEISEKDEKEEEK
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgatgggctggattgaccgggtggtcccccagcccccggtgccccatgtgacagaggag
acccctgtgcaggagctgcagccagctaaggcaccaacagggaaggctggtggccccaca
gatgctgctgaccattcccctgctgccattgaagaaaaggaaaagaaagtgacctttgtg
gtctctgaggactcaagttctgtgtttgacagtgtggggagcagtgtgctctcctggctc
tcctatgggctggagaaggtgattccccagccagccccagccccagggctgcaggcactc
gggaagagcttcgagacaagcgtcgacattgctgaggagacagaggtccaggtccttggg
gatgaggacgacgacggtctggagataactcccttcgatgccgaggaggatgtgtccgag
ggcgaacaggagacgtccccgcagcagtgggcaggaaaccgggtgctcagctggctgtca
cagggcttcgagaggattttgccgcagccagaggggatgaaaaagccagagacagagccg
aaggagaggagcgaaggggcggcggcaggcacaaaagagaccaaaacccaggcgaagtca
aaatgcagcgtttcagagagcaccccagcggcagagaaggcggcagcagcggccaagggg
cagccggagccggtgacagcgctcagccctcagtccgtggctgtggatggtggcaggatg
ttcagctggttcatgcaggggctggagaaggtgatgccacagccggtgagcagggagagg
caggacacacagggagtggccacagcaacctcgagtcctgtggaacaaattcatgtcgcc
cccgggaaacaggaggaaacccatctcatcctgaaagagatcagtaatgaccagattaat
gaagagatggcagcctgggctcagatggctgagctgcaggcagacactcatcaccttccc
acgatacaggaggaacctcaggaagaagaagacagaccgtgtttgtgctccccaaacact
gccaggggggaagaggaaaaagaggagggggaggaagagaggatgaaagaggaggaagag
gagatgaagcaagaggaggaagagaggaaaaaagaggaagaggagatgaaacaagaagag
gatgagaggaaaaaagaggaagaggagatgaagcaagaggaggatgagaggaaaaaagag
gaagaggagataaagaaagaggaggaggagaggaaaaaggaggaagaggagaacggagga
aatgaagaagaggagaggaagcaagaagaggaggaggacaggaaaaaggaggaagaggtg
agggaaaaagaggaggaggatgacagtaaaaaagaggaagagggcaggaaaaaagaggag
gaggagaggaagaaagaggaggaggagaggaaaaaagaggaagaggaaaggaagatagag
gaggaggaggagaggaaaaaagaggaagaggaaaggaagatagaggaggacaggaagaaa
gcggaagaggagaggaagaaggaagaaaagagaaagaaggaagagaagaggaaaaaagat
aaggaaaggaaaaaagagaaggagaagaagaaagagctaaagagaaaagaggacgagaag
aaagaggacgagaagaaagaggaagagcaggaggagagtgcagcacccctgctgcagcca
cagtgtctccctgctgatgagggtgtggatgaagcctgccttgctgaggagaccctcagg
attgagcagctggaagaagttgagataagagatctcgaaagtgcttttgtgcaggtggaa
gagaagacagctgaagctgctgaaactgatgctgaaggtcattgccccaccgtggagatc
aaggacgtggacagcccgggccgtgccgtggagatccatggttcccacggagcgctgccc
gccgccggcgctcccaacctgctggcggtgcccggcgcagcatcccccaggaggaagcga
ctgctgccacaggatggtctggacaagaggttggtgagccaatcccccacccaagagctg
ggctgggacgaggagcagagggaaagcctgcccgagcgcatcggctcagcctcgagcctg
agcagcaccatcatcaacacccggctccaggagctggtcaggctcttcaaagagaggact
gagaaggtgaaggagaagctgattgaccccgatgtcacctcagatgacgagagccccgtg
gcatctcccaccaagccagcacctgcagcagccccgctgcctgccccaggaggggagccg
gagggggacaaacctttggaggatgaccactactgtgagatgctctgctgcacattcaag
caccggccctggctggaccgcctgaaaagttaccagttccccagcagcatcgaccccctc
accaatctgatgtacgtgctgtggctgttcttccttgtcatggcctggaactggaattgc
tggttgatccctgtgcgctgggctttcccctaccagactccagcaaacatccactactgg
ctgctgatggactacctctgtgacctcatttatctgctggacatcctcatctttcagacc
cggctgcagtttgtgcgggggggagacatcattactgacaaaaaggccatgaaagagaac
tacctgcgatcacaacgcttcaagatggatgtgctgtgcctcctgcccctggatttcttc
tacttcaaagtgggtgtcaacccgctcctgcgcttccctcggtgtctgaagtacatggcc
ttcttcgagttcaacaaccgcctggaggccatcctgaccaaggcatacatctacagagtg
attcggaccactgcctacctactgtacagcctgcatgtgaactcctgcctctactactgg
gcctcagcctacgaaggactgggctccaccacctgggtctatgatggagaaggaaacagc
tacatccgctgttactactgggcagtgaaaaccctcatcaccatcgggggcctgccagac
cccaagacactgtttgagattgtcttccagctgctcaactacttcacaggcgtctttgct
ttctctgtcatgatagggcagatgagagatgtggttggtgctgctactgcagggcagact
tactatcggagctgcatggacagcaccatcaaatacatgaacttctacaagatccccaga
actgttcagaaccgtgtgaagacgtggtatgagtacacgtggcactcccaaggcatgcta
gatgagtctgagctgctggttcagctgccagacaagatgaggctggacatcgccattgat
gtgaactacaacatcgtgagcaaagtggcccttttccagggctgtgacagacagatgatc
ttcgacatgctgaagcggctcagatctgtggtctacctgcccaacgactacgtgtgcaag
aagggagaaatcggccgtgagatgtacatcatccaggcggggcaagtgcaggtgctgggg
ggacccgatggcaaatccgtgctggtgactctgaaagctggatctgtcttcggggaaatc
agtttgctggcagcaggagggggaaatcgccgcaccgcaaacgtggtggcccacggcttc
gccaaccttttcattctggaaaagaaggacttgaacgagattttggtgcattacccggag
tctcagaagctgctgcgcaagaaggccaagaaaatgctgagaagcaacaacaaacccaag
gatgagaaaggagacccgctgatcatccccccaaaagctgacaccccaaagctgttcaag
gctgtcctggctgccagagggaggacggggggccagggggccctggggcggctccgctgg
aggctgaaggagctgaaggcgatgcaggacacacagggctccagtgtcagcccaacccca
ccaaaatcaccaatgcaccagagatctcctgtcacatcccacaaagcacaaacccgccca
ggagaagagatattctcagaatcttctgatcattcagtcaccattcgtgtgatttccaca
gcaaaagaagatgaggagatccttgctgctgagatttcagagaaagatgaaaaagaagaa
gagaaatga
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