Sylvia atricapilla (blackcap): 136367434
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Entry
136367434 CDS
T10263
Symbol
SEC24A
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136367434 (SEC24A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136367434 (SEC24A)
Membrane trafficking [BR:
sati04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
136367434 (SEC24A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
136367434
NCBI-ProteinID:
XP_066185128
LinkDB
All DBs
Position
14:9234906..9255844
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AA seq
1092 aa
AA seq
DB search
MAQPAGAPAGQHPYTNGPVQNQLMHSPDGQGYSPAVPGSYSHQMPAKVPPHQASGQYGYS
GSQNVSQLNSYQGPGQTLNRPPVAAFSGSPVQQPGPVPQVLPPALQNSAAVSSAGSFPPG
ASPPVLSNWQYSQTPVSQPLGAQPGHLAPVPGTGSAQPPASLPGSTNPAGSYQYAASPGA
PPLQNSYMKPGPAPPPVTQPVTPLHPPRPPLGPPPVAGPPRPSPAVAGPPSAQSLLKSAT
NQEGDARSAASDVSVVQNSYDAIEGGGLMATPHHSPAAPNLKMNRSVGYSYPALPPGYQH
TSPPGAPGMNTSALQYPDGAKHFHQPALGTNHLTASMGGLSLQQEGLRPVNLLQERNILP
TTLLKAPVPNLHEDIQKLNCNPELFRCTLTNIPQTQALLNKAKLPLGLLLHPFKDLSQLP
VVTSSIIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFLYNPVTRVYGEPHKRP
EVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAIETGYLNTVCQTLLDNLDSLPGNTR
TKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIEDVFIPMPENLLVNLNENKELIQDLLKT
LPQMFTKSLETHSALGPALQAAFKLMSPTGGRITVFQTQLPSVGMGALKSREEPNQRATA
KDIHLTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSVYYYQSYHH
KHNPVQVEKLQKELKRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNP
DAGYAVQMSVEESLTDMQVVSFQSALLYTSSKGERRIRVHTMCLPVVTTLSDVYLGADVQ
AITGLLANMAVDRSVSATLSDARDALVNAVIDSLAAYRSSVLSIQQPGLTAPFSLRLFPL
YILALLKQKAFQTGTNTRLDERIFTMCQVKNQPLVYLMLMTHPSLYRVDNLTDEGALNIN
DRTIPQPPLLQLSVEKLSRDGAYLMDAGSVMFLWIGKNCGQGFISQVLGVPNYGSIPQNM
THLPELETAESIRTRAFVSWLREQRPFFPILYIIKDESPLKSSFLQNMIEDRTESALSYY
EFLLHIQQQVNK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcccgccggggcccccgccggccagcacccctacaccaacggccctgttcag
aatcagctgatgcattccccagatggccaaggatacagtcctgcagttccaggatcatac
tcccatcagatgccagcaaaggttcctccacaccaggcttctggacagtatggctatagt
ggctctcagaatgtttctcaattaaacagttaccaaggacctggccagactctcaataga
ccaccagtggcagctttctctgggtcaccagtacaacagccaggtcctgttccacaagtg
ctgccgcctgcattacagaactcagctgctgtatcatctgctgggagttttcctcctgga
gccagcccaccggtgctttcaaactggcagtacagccagactcctgtgagccagccactc
ggggctcaaccgggccacttggctcctgtgcctgggacggggtcagcccagccgccggcg
tcgttaccgggaagtaccaaccctgcagggagttaccaatatgctgcttctccgggggct
cctccgctgcagaacagctacatgaagccaggacctgcacctccaccagtgactcagcct
gtaactccactccaccctccaaggccacctttaggacctccaccagttgctgggccacct
aggccatcaccagcagtagcaggaccacctagtgcacagtctctgctaaaatcagctaca
aaccaagaaggtgatgccagatctgctgccagtgatgtgtctgtagtgcaaaacagctac
gacgcaattgagggtggtggcctcatggcaactccacatcattctcccgcagccccgaat
cttaagatgaatagaagtgttggatattcttaccctgccttacctccaggctaccaacat
acttctccccctggagcaccaggaatgaatacatctgctttgcaatatccagatggagca
aaacatttccaccagcctgccctaggcactaatcacttaactgcatcaatgggtggcctg
agtctacagcaagaagggttaagacctgtgaatcttcttcaagaaagaaatattcttcct
accacccttttgaaggctcctgttcccaacttgcatgaagacatccagaagctcaactgc
aatcctgagttgttccgctgtaccctgactaacattcctcaaactcaggccttattgaat
aaagccaaacttcctttggggctcctgcttcatcctttcaaagacttatcgcaattgcca
gtggtcacttccagtattattgtgagatgccgttcctgccggacgtacatcaaccctttt
gtcagcttcctagaccaaaggagatggaaatgcaatttgtgctatagagtcaatgatgtt
cctgaagaattcctgtataatcctgtgacaagagtatatggagaacctcataaaagacct
gaagtccagaatgctactattgagtttatggctccatctgaatacatgctgcgtccacct
cagccacccgtgtacctctttgtgtttgatgtctctcacaatgcaatagagacaggatac
ttgaacacagtctgccagaccttgttagacaatcttgactcgcttcctgggaacactaga
acaaaaataggcttcataacatttgacagcacaatccatttctacagtcttcaggaaggt
ctttctcagcctcagatgcttatcgtttcagatattgaagatgtatttataccaatgcca
gaaaacttactagtaaatttaaatgaaaacaaagagctaattcaagatctgttgaagaca
ttgccacagatgtttaccaagtccctggaaactcacagtgctctggggcctgcattacag
gctgcctttaaactgatgtcccccactggaggtagaatcactgtcttccagacacagctc
ccatctgtgggaatgggagcactaaagtcacgagaagagccaaaccaaagagcaacagca
aaggatatacatctgacaccatcaactgatttttacaagaagttggccttggactgttca
gggcaacaggttgcagtggatttatttcttcttagtgggcaatattctgacttggcttct
ctaggttgtatatcaaggtattctgcaggtagtgtctactactaccaatcttaccatcat
aaacacaaccctgtccaggtggagaaattgcaaaaggaactgaagcgatatttaactaga
aagattgggttcgaggctgtcatgaggataagatgtaccaaaggtctttccattcatact
ttccacgggaacttctttgtacgatctacagacttgttgtcattacccaacgtaaaccca
gatgcaggatacgctgtgcaaatgtcagtggaagagagtcttacagatatgcaagttgtt
tcttttcagtcagctctcctctacacctccagcaaaggtgaaagacggattcgtgtccac
actatgtgcttacctgttgtcacaacactgagtgatgtgtacctaggggcagatgtgcag
gccatcactgggctcttagccaatatggccgtggaccgctctgtttctgctacgctgagc
gacgctcgggacgccctggtcaatgcagtgatagattctttagctgcttatcgctcctcc
gtgctgagcatccagcagcctgggctcacagctcccttctcactgcgcctcttcccactc
tatatactggcactcttaaaacagaaagcatttcaaactgggacaaacacacgtttggat
gaacgcatcttcaccatgtgtcaggtgaaaaaccagccccttgtttacctcatgctcatg
acacatcccagtctgtacagagttgataatctcacagatgagggggctcttaacataaat
gacagaactatacctcagccaccccttctccagctgtcagtggagaagctgagtagggat
ggtgcttatcttatggatgctggctctgtgatgtttctgtggattgggaagaactgcggg
cagggcttcatcagccaagtccttggagtcccaaattatggctcaataccacagaatatg
acacatctcccagaacttgaaactgcggaatccatcagaacacgagcttttgtttcttgg
ctgagagaacagagacctttctttcctatactatatataataaaggatgagagtccattg
aaatcaagttttctgcaaaatatgattgaagacagaacagaatcagccttatcatactat
gaattcctccttcatatacagcagcaagtgaataaatga
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