Sylvia atricapilla (blackcap): 136370386
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Entry
136370386 CDS
T10263
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136370386
Transcription factors [BR:
sati03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
136370386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
136370386
NCBI-ProteinID:
XP_066189851
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Position
21:1558940..1572529
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AA seq
274 aa
AA seq
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MYVSYLLDKDSTMYPGSARCTNNNLPVQNFVSAPAYPEYLGYHPVPGLDSHGQAAWGSHY
GAQREDWSAYGPGPASAAAHINGSSPGQGSYSSADYSSLHPAPAAAPLPPGDSVSAQHGS
PNSQRHGSYEWMRKTVQSTSTGKTRTREKYRVVYTDHQRLELEKEFHYNRYITIRRKSEL
AANLRLSERQVKIWFQNRRAKERKLMKKKMTHFDGSSLGSLQSDSGSVSPMPVPEAQTHS
EMAGSLFAAPPGPAALPIGALQHAGSLQQVVASQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagctatctgttggataaggacagcaccatgtatccgggatccgcaaggtgc
accaacaacaacctgcccgtgcagaacttcgtgtctgctccagcctaccccgagtacctg
ggctaccaccccgtgccaggcctggacagccacgggcaggcggcctggggctcccactac
ggcgcccagcgcgaggactggagcgcctacggcccgggccctgccagcgccgctgcccac
atcaacggctcgtcccctggccagggctcctacagctctgctgactacagctccctgcac
cccgcgcctgccgctgcgcccctgcctcctggagacagcgtcagcgcccagcacggctcg
cccaacagccaaaggcacggctcctacgagtggatgaggaaaacggtgcaatccacgtcc
acaggtaaaacaagaacaagagagaagtaccgagtggtttacacagatcatcagagatta
gaattagagaaggagtttcattacaacagatacattacaatcagaaggaagtctgaactt
gctgcaaacctaagactttccgagagacaggtgaaaatctggttccagaaccgcagagcc
aaagagagaaaattaatgaagaagaaaatgactcacttcgacggcagcagcctgggctct
ctgcagagtgactctggctccgtgagcccgatgccggtccccgaggcacagactcattcg
gagatggccggctctctgttcgcggcgccgcccggccccgccgctctccccatcggcgcc
ttgcagcacgcagggagcctgcagcaggtggtggcctcgcagtga
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