Sylvia atricapilla (blackcap): 136374535
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Entry
136374535 CDS
T10263
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136374535 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sati03019
]
136374535 (SKIC3)
Messenger RNA biogenesis [BR:
sati03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
136374535 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_16
TPR_8
TPR_17
TPR_11
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_15
ARM_TT21_C
TPR_30
BTAD
YfdX
TolB_N
TPR-S
TPR_20
TPR_5
Retrotran_gag_2
Fis1_TPR_C
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
136374535
NCBI-ProteinID:
XP_066196026
LinkDB
All DBs
Position
Z:31736106..31781700
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKPNQTDVKGDLADVYQKLLELYESGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLIRMKQEEGAEKTELHQLWKKMIQLLKDSTRNQDNKIGQ
LLLTAFEHALHSADTVPGEDHQNLYKDFIQCLIKFPHEVARLEKACHDMMALYPTVSYPL
EVLCLHFVQSGTLSEETLHCFSRLLEMDANSGPGIICFGIKCLKENKYKEAVMSLTEGLQ
KTNQCPAAWCYLAEAQVKIHEHRNAVLSCNQALEALGTPEGPNFQWKNLALQLKAEILIK
IADADAAEEAIKALEQIVDGSSDPVVLALRGQAYLKKGLMDQASKISQELLLSHPHLAEG
HALEGFIHYSQKNYEQAEKSFLNAIERKAGTAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDSYLGSAFCYLGNYYRDIAGDKSRARGCYKKAFELDETDEESGTAAVNLSVELG
DMDTALSILNEVTEKARPGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLNRGSYSTALKSFRKASELNPGLVYSIYKAAALEQILGKYENAIATYQEILKKT
EDYVPALKGLGECYLMLARSALDNYFDRKAVDYLEQALAYFTRAVKHRPDISCLWKLLGD
TCTSVHVISPAKVNVQVLGSLLSKNATKQILKKSELLVLGGRCYGRALKLMALPSIWCDL
GINYYRQAEHLTAVSTDMNEISELLEKSLQCIKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLVTGNIEQAHEAFKVAQSLDPSYLLCWIGQA
LIAETIGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKTNRNTELYLYNIVQMNAI
PAAQVVLSKYTERNPDDASAFTMFGFLNEYLNLKQQAAYAYERAASLLKNSEDTERYHTA
MQNYGRSLCALGLCDEAIEVYTSIPLTEFDGIVGLALAYFKKGLLEESIRAYEKALSVAG
SEEDKVHILTAMAIIEYKLNRVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHEKGGEEIYERCLIASALYALQGRNVAIQREVSKAIHSYPDNPALWSLLSHLV
PLYALKKTKGGAVAGSVAHTLDVNCGKEAFLNIAVNQLVAGCHMLEDKKNNPLKNIQKAI
HICPDNPAAWAVLMAACHAENTVVCLNNTEPKHTGLEMTLVSTVSTKTGESNLPHNYVRA
LEDWCLCQAITSLEETGKLSEAEALCNKGLKSCPEHPALFLLLRQVQCKQLLQSHKELPD
NILEELRKTVMSSSSSAAAWQWLAKIYQSQRMMTGAEMCYRKSLQLASQQGSWNGKLSSL
LKLAMLALEICMANVSNEHWPSLVQEATTEALKLSPSPLAALLQALLQYNCKMGARETRR
MLERVIYQPANPETIVSVARWYLLQHLYAKDDCELIDVLLENAKANGDVRVLELNEKLSA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaagaggtgaaggcagcattaaagagtgctagagatgcaataagaaataaa
gagtataaggaggccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtattcattggcctcgcagctgctgagttagagcagcctgatcaggccaaa
ggggcatacaagaaggctattgaacttgaaccaaaccagttactggcatggcagggatta
gcaaatttgtatgagaaacccaaccaaacagatgtcaaaggagacttagcagatgtttac
caaaagctcttggaactctatgaaagtggtgacaagcagaaatggtgtgatgtatgtaac
aagcttgtggagctgtaccatcaagaaaagaagtatttagaggtggctgaaacttggcag
aaactaataaggatgaaacaggaggaaggtgcagaaaagacagagcttcatcagctttgg
aagaagatgatccaattactgaaagatagtacaaggaaccaggataataagattgggcag
ttgcttttgactgcatttgaacatgccctgcactctgctgacactgttcctggtgaagac
caccaaaatctttacaaagacttcatacagtgcttgataaaatttcctcacgaagtggct
aggttggaaaaggcttgtcatgatatgatggctttgtaccctactgtgagttaccctttg
gaagtactttgcttgcattttgttcagtcaggtactttgtcggaagagaccctgcactgt
ttctctcggcttttggagatggatgcaaacagtggtccaggcataatttgttttggtata
aaatgcctcaaagaaaataaatacaaggaggctgttatgagtcttactgaaggtttgcag
aagactaaccagtgtccagcagcctggtgttatcttgcagaggcacaggtgaaaatccat
gaacacaggaatgctgtcctgtcctgcaatcaagctcttgaagctcttggaactcctgag
ggtcctaattttcagtggaagaaccttgcccttcagttgaaagcagagattttgattaaa
atagctgatgctgatgctgcagaagaagccattaaagcacttgagcagattgtagatgga
agcagtgatccagtggttttagctctcaggggtcaggcttatctaaagaaaggtttgatg
gatcaggcttcaaagatttcacaagagcttctgttgtcccatcctcatctggctgagggc
catgctttagagggtttcatccattattcccaaaagaactatgaacaggcagaaaaaagt
tttctaaatgctattgaaagaaaggctggaactgcagagtatcatcagtacctggggctc
acatactggttcatgagtgatgagacaaaaaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaattggacagctacttgggaagtgccttttgttatctaggtaactac
tacagagacattgctggagacaaaagcagagctcgtggttgctataaaaaagcttttgaa
ctggatgagacagatgaagaatctggaacagcagctgtcaacctaagtgtggaacttgga
gacatggacactgctctgtcaatcctgaatgaagtaactgaaaaagcaagacctggtaca
gcaaaatgggcctggcttcatcgtggactttactacttgaggactggtcagccgtcacaa
gcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctcttggggaggcttacttgaacagaggtagctactcaacagctctgaaatccttcagg
aaagcaagtgagctgaacccagggcttgtgtacagcatttacaaagctgcagcacttgag
cagattctaggcaaatatgaaaatgctatagctacctatcaagaaattttaaagaagaca
gaagactatgtgcctgcgctgaaaggacttggtgaatgttatctcatgctagcaagatca
gcccttgataactattttgataggaaggctgtggattacctagagcaggcccttgcatat
tttacaagggcagtaaagcaccgtcctgatatatcttgcctctggaaactgttaggagat
acctgtactagtgtacatgttatttcaccagccaaagtgaatgttcaagtactaggatct
cttctgagtaaaaatgcaaccaaacagattctgaagaaaagtgagcttcttgtactggga
ggaaggtgttatggcagagctttaaaactgatggctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcagtgagcactgacatgaatgag
atcagtgaactgctagagaagtctttgcagtgtatcaaaaaagctgtgagacttgacagc
aaaaatcatctttattggaatgcacttggtgtagttgcctcttgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaattaatgttgtt
gcctggaccaacttgggggttttgtatctggtaactggaaacattgagcaagctcatgaa
gccttcaaggtagcccagtctctggatccttcttacctgttgtgttggattggacaggct
cttattgcagagaccataggcagctatgataccatggatctcttcaggcatacgactgaa
ctcagtatgcatactgagggagcaaaaggctatgcccactgggtatgttcaacgctgcag
gacaaaaccaacagaaacactgaactgtatctgtacaacattgttcaaatgaatgctata
ccagcagcccaagtggtcttgagcaaatatacagaaagaaatccagatgatgcttctgct
ttcacaatgtttgggtttttgaatgagtatctgaatttaaaacagcaggcagcctatgcc
tatgagagggcagcttcactgctgaaaaactcagaggatactgagagataccatacagca
atgcaaaactatggcaggtcactgtgtgctcttgggctgtgtgatgaggccattgaagta
tacacatcaatacccctaactgagtttgatggcattgtggggctagcattagcttacttc
aagaaaggactcttagaagaaagtatcagagcctatgaaaaagccttgtctgttgctggg
tctgaagaagataaggtacatatcctgactgccatggcaataatagaatataaactgaac
agagtggatgctgcaaagacactgctgtttaaatgctcattaaaggaacctagtacggaa
agcctgaaggctttgtgcacactgggattggtaaagcaggatgcaacacttgcaacagcc
gccctaaaagaattgctgaagcatgaaaaaggaggtgaagagatttatgagaggtgtctc
attgcatctgctctttatgcattacaaggtagaaatgtggcaatccagagggaagtctcc
aaagcaatacacagttaccctgataatcctgccctttggtctcttctgtctcatctagtt
ccactgtatgcattaaaaaagacaaaaggaggagctgtggcaggaagtgtggcacataca
cttgatgtaaactgtggaaaggaggccttcctgaatattgccgttaatcagttggtagca
ggatgtcacatgttagaagataagaaaaacaatcctctcaaaaatattcagaaggccatc
catatctgtccagataatcctgctgcttgggcagtgttaatggcagcctgtcacgctgaa
aacactgttgtctgtctaaacaacactgaaccaaagcacacaggtctagagatgacactt
gtgtctacagtttcaaccaaaactggagaaagtaatctcccacataattatgtccgtgct
cttgaagactggtgtctgtgtcaagctattaccagtctagaggaaactggtaaactatca
gaagctgaagctctttgcaacaagggtttaaaaagctgccctgagcacccagctctgttt
ttgcttttgagacaagttcagtgtaagcagctgttgcagtctcacaaagaacttccagac
aacatcctggaggaacttcgcaaaacagtcatgtccagttcatcctcagctgcagcctgg
caatggctggcgaaaatttaccaatctcagagaatgatgactggagcagagatgtgttac
agaaagagtctgcagttggcatcacagcagggcagctggaacgggaagttatccagtctg
ctcaagctagctatgcttgcactggaaatctgcatggctaatgtctcaaatgaacactgg
ccatccttggttcaggaggcaacaactgaagctttgaaactttctccttcccccttggcc
gctctgcttcaagccctgctacagtataattgcaaaatgggagcaagggagactcgacgg
atgttggagagagtcatttatcaaccagcaaatccagaaaccatagtgtcggtggcacgc
tggtacctcctgcaacacctgtatgccaaagatgactgtgaattaatagatgtgcttctg
gaaaatgccaaagctaatggagatgttagagttctggaactaaatgagaaattgtcagca
agtgcctag
DBGET
integrated database retrieval system
