Shewanella avicenniae: JYB87_05805
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Entry
JYB87_05805 CDS
T07845
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
savi
Shewanella avicenniae
Pathway
savi00900
Terpenoid backbone biosynthesis
savi01100
Metabolic pathways
savi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JYB87_05805 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
savi01006
]
JYB87_05805 (ispA)
Enzymes [BR:
savi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
JYB87_05805 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
JYB87_05805 (ispA)
Prenyltransferases [BR:
savi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
JYB87_05805 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QSX34749
UniProt:
A0ABX7QTJ3
LinkDB
All DBs
Position
complement(1312177..1313055)
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AA seq
292 aa
AA seq
DB search
MLSDVIAHYQQRVNKHLTSVLDNLPVTDPALKAAMSHGVLLGGKRVRPFLVYAVGEMLGV
AEDKLDSCACAIECIHAYSLIHDDLPAMDDDELRRGQPTVHIAFDEATAILAGDALQSMA
FEILSSDDHFTATQQLAMVKALAKASGYHGMCGGQALDMAATDKQIDLAQLTQLHRLKTG
ALIHCAVELAVIAASGDSHTQQRLGDYADAIGLAFQVQDDILDVTSSTEELGKPQGSDTK
SNKSTYPRLLGLDGAKSTAQQLLQDALSALDDLPYNNQIIAEFARYIIERRV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
ttgttatccgacgtcatagcccactatcagcaacgtgttaataaacatctcacatcagtg
ttagataacctgccagttaccgaccccgcattaaaagccgcgatgagccatggcgtattg
ttgggaggtaaacgtgtacgaccatttctggtgtatgccgtgggagagatgctaggcgtt
gccgaagataagctagacagttgtgcctgtgccattgaatgcattcatgcctattcgctc
attcatgatgatttgccggcgatggacgatgatgaattgcgccgtggtcaaccaacggtc
catatcgcatttgatgaggcaacagccattcttgcaggtgatgcgttgcagtcgatggcc
tttgaaatcctgagcagcgatgatcattttactgcaacccaacaactggcgatggtgaaa
gcactggcgaaagcctcgggctatcacggcatgtgtggcggccaagcgttagatatggcg
gcgaccgacaaacagattgatttagcccaattaacccaattgcatcgtctcaaaacaggg
gcgcttattcactgcgctgtagaactcgcggtgattgccgccagtggcgacagccacacc
cagcagcgcctaggcgattacgccgatgcgattggattggcgtttcaagtccaagacgac
attcttgacgttaccagctcgactgaagagttaggcaaaccgcaaggctctgatactaaa
tcaaataaaagcacctatccgcggctgttaggactggatggcgccaaatcaactgcgcag
caactgctgcaagatgcactatcagccttggatgatttgccctacaataaccaaataatt
gctgaattcgcccgctatatcattgagcggcgagtataa
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