Shewanella avicenniae: JYB87_16035
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Entry
JYB87_16035 CDS
T07845
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
savi
Shewanella avicenniae
Pathway
savi02020
Two-component system
savi02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYB87_16035
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JYB87_16035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
savi02035
]
JYB87_16035
Bacterial motility proteins [BR:
savi02035
]
Flagellar system
Chemotaxis proteins
MCPs
JYB87_16035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
dCache_1
Mce4_CUP1
mit_SMPDase
TMF_DNA_bd
DUF3050
Sec2p
Motif
Other DBs
NCBI-ProteinID:
QSX33213
LinkDB
All DBs
Position
3645652..3647811
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AA seq
719 aa
AA seq
DB search
MKIASIQGKIAAVAGICLLISAVTLIGYALFSANENETLVSNRVGTLVEKQASDALLTLA
QERAGSIATEFSHALDITKTLANSFDLVHSETRPVNISRAEVNNILYNVLTRYTNLNGTY
SCWEPNALDGRDADFVGANDGNNKETGRFTPYWTRNAAGHIAVQPLVEYDTDTKHPNGVL
KGGWYIGPKNTLKPSVLDPIPYIVQGKQVWLATISAPIVENGKFYGVVGADYDLTFVQQL
ATNLQKELYNATAEVTIVSYQGLVVASSSQPDKIGQPLAQVVGDARAQKAIERIQKGETL
LENDQEAKKMRVLAPITLGDTGKPWAVMINVPQEQVLAEAMALSNELAENSRSDVFWQFA
VGIGVTVVALVALWLSAGSIARPISEAASVARTIRLGDFSKRMQYQSGDEVGQLADALNE
MSASLNDRAGLAKRISEGDLTVNVELASSNDQLGQALREMVAHLSQLVRQIQDTSQSIAD
NSTQVSNLSEVLSDGAMQSASSITQMGAAMVEISSQTSANADNADKANRFSNESTTAAEK
GASHMEEMVAAMKAIHDSGERIHQIINAIDEITAQTNLLALNAAIEAARAGDAGRGFAVV
ADEVRQLAQRSADAASDAAKLIDESSANTQSGIAISQRTAEALTQIRASTAEVSALVANI
AVASEEQVQGINETTTGLNQVDGVTQRNSENAMACKESASELLRQSTQLKNLVARFKVN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgcatcgattcaagggaaaattgccgctgtggcagggatatgccttttaata
tcagcagtaacacttatcggatacgcattgtttagcgccaatgaaaacgaaacgttagtt
tctaatcgcgttggcaccttagtcgagaagcaggccagcgacgccttgcttaccctcgca
caggaacgagccggcagtatcgccactgagtttagtcacgctctggatatcaccaaaacc
ttggctaacagctttgatttggtgcattcagagacacgaccagtgaatatctctcgcgca
gaggtgaacaatattctctacaacgtgttgacccgctacaccaacctcaacggcacctat
tcgtgctgggaacccaatgccctagatggccgagatgccgacttcgttggggccaatgat
ggaaataataaagaaacgggacgctttaccccctattggacccgcaacgccgcgggccat
attgcagtacaaccccttgtggaatacgacacggataccaagcacccgaatggcgtactc
aaaggtggctggtacataggcccgaaaaacaccctaaaacctagcgtactcgatcccatt
ccttacatagtacaaggcaaacaagtgtggttggctacaatctctgcgccgattgtcgaa
aacggcaagttttatggggttgtaggtgccgattacgacctgacgtttgtacaacaactg
gcgactaatctgcaaaaagagctatacaacgctaccgctgaggtcaccattgtgagttat
caggggctggtcgttgcaagtagctcgcagccagacaaaattggccagccattagcccaa
gttgtgggcgatgcgcgcgcgcaaaaagcgattgaacgtattcaaaaaggtgaaacctta
cttgaaaacgaccaagaagcgaaaaagatgcgcgtgttagcgccaatcaccctcggtgat
acaggtaaaccatgggcagtaatgatcaatgtgcctcaagaacaggtgctggctgaagca
atggccttgagcaatgaactggctgaaaacagccgcagtgatgttttttggcagtttgcc
gtgggtattggggtgaccgtagtggcactcgtcgccttatggttatcagcaggtagcatc
gcccggccgatcagtgaagccgccagtgtcgcccgcaccattcgccttggcgatttttcc
aagcggatgcaatatcagtcaggggatgaagtcggccaactcgccgatgcactcaatgag
atgagcgccagcctcaatgatcgcgccggattagcgaagcggatcagcgaaggggatctg
accgttaatgtagaactcgcctccagcaatgaccaactggggcaagcgctgcgagagatg
gtggcacatttaagccagttggtgcgacagatccaagacacctcgcaaagcattgctgac
aactccacccaagtgtcaaatctcagtgaagtgttgtccgatggcgccatgcagtcggca
tcatcgataacccagatgggcgcggcgatggtagaaatatctagccagacatccgccaac
gccgataacgccgacaaagccaaccgcttctccaatgaatccacaaccgccgcagaaaaa
ggcgcaagccatatggaagagatggtcgccgcgatgaaagcgatccacgactccggcgaa
cggatccatcagatcatcaatgcgattgatgaaattactgcacaaaccaacttgctggca
ctgaacgcagcaatcgaggcggcgcgcgcaggtgatgcaggccgaggctttgcggtggtc
gccgatgaagttcgccagttggcgcaacgcagtgctgatgcagcaagtgatgccgccaag
ttgattgatgaaagctcggccaatacccagtctgggattgccatttcacagcgtactgca
gaagccctcacccaaatccgcgcctctaccgcagaggtatcggcgttggtggccaatatt
gcagtggcctcagaggagcaagtacaagggattaacgagaccacaactggcctgaatcag
gtagatggtgtcacccagcgcaacagcgaaaacgccatggcctgtaaagaatcagcctcg
gaactgttacgccaatccacacaactgaaaaatttggtagcacgctttaaagtgaactaa
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