KEGG   Shewanella avicenniae: JYB87_16035
Entry
JYB87_16035       CDS       T07845                                 
Name
(GenBank) HAMP domain-containing protein
  KO
K03406  methyl-accepting chemotaxis protein
Organism
savi  Shewanella avicenniae
Pathway
savi02020  Two-component system
savi02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:savi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JYB87_16035
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    JYB87_16035
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:savi02035]
    JYB87_16035
Bacterial motility proteins [BR:savi02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    JYB87_16035
SSDB
Motif
Pfam: MCPsignal HAMP dCache_1 Mce4_CUP1 mit_SMPDase TMF_DNA_bd DUF3050 Sec2p
Other DBs
NCBI-ProteinID: QSX33213
LinkDB
Position
3645652..3647811
AA seq 719 aa
MKIASIQGKIAAVAGICLLISAVTLIGYALFSANENETLVSNRVGTLVEKQASDALLTLA
QERAGSIATEFSHALDITKTLANSFDLVHSETRPVNISRAEVNNILYNVLTRYTNLNGTY
SCWEPNALDGRDADFVGANDGNNKETGRFTPYWTRNAAGHIAVQPLVEYDTDTKHPNGVL
KGGWYIGPKNTLKPSVLDPIPYIVQGKQVWLATISAPIVENGKFYGVVGADYDLTFVQQL
ATNLQKELYNATAEVTIVSYQGLVVASSSQPDKIGQPLAQVVGDARAQKAIERIQKGETL
LENDQEAKKMRVLAPITLGDTGKPWAVMINVPQEQVLAEAMALSNELAENSRSDVFWQFA
VGIGVTVVALVALWLSAGSIARPISEAASVARTIRLGDFSKRMQYQSGDEVGQLADALNE
MSASLNDRAGLAKRISEGDLTVNVELASSNDQLGQALREMVAHLSQLVRQIQDTSQSIAD
NSTQVSNLSEVLSDGAMQSASSITQMGAAMVEISSQTSANADNADKANRFSNESTTAAEK
GASHMEEMVAAMKAIHDSGERIHQIINAIDEITAQTNLLALNAAIEAARAGDAGRGFAVV
ADEVRQLAQRSADAASDAAKLIDESSANTQSGIAISQRTAEALTQIRASTAEVSALVANI
AVASEEQVQGINETTTGLNQVDGVTQRNSENAMACKESASELLRQSTQLKNLVARFKVN
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgaaaattgcatcgattcaagggaaaattgccgctgtggcagggatatgccttttaata
tcagcagtaacacttatcggatacgcattgtttagcgccaatgaaaacgaaacgttagtt
tctaatcgcgttggcaccttagtcgagaagcaggccagcgacgccttgcttaccctcgca
caggaacgagccggcagtatcgccactgagtttagtcacgctctggatatcaccaaaacc
ttggctaacagctttgatttggtgcattcagagacacgaccagtgaatatctctcgcgca
gaggtgaacaatattctctacaacgtgttgacccgctacaccaacctcaacggcacctat
tcgtgctgggaacccaatgccctagatggccgagatgccgacttcgttggggccaatgat
ggaaataataaagaaacgggacgctttaccccctattggacccgcaacgccgcgggccat
attgcagtacaaccccttgtggaatacgacacggataccaagcacccgaatggcgtactc
aaaggtggctggtacataggcccgaaaaacaccctaaaacctagcgtactcgatcccatt
ccttacatagtacaaggcaaacaagtgtggttggctacaatctctgcgccgattgtcgaa
aacggcaagttttatggggttgtaggtgccgattacgacctgacgtttgtacaacaactg
gcgactaatctgcaaaaagagctatacaacgctaccgctgaggtcaccattgtgagttat
caggggctggtcgttgcaagtagctcgcagccagacaaaattggccagccattagcccaa
gttgtgggcgatgcgcgcgcgcaaaaagcgattgaacgtattcaaaaaggtgaaacctta
cttgaaaacgaccaagaagcgaaaaagatgcgcgtgttagcgccaatcaccctcggtgat
acaggtaaaccatgggcagtaatgatcaatgtgcctcaagaacaggtgctggctgaagca
atggccttgagcaatgaactggctgaaaacagccgcagtgatgttttttggcagtttgcc
gtgggtattggggtgaccgtagtggcactcgtcgccttatggttatcagcaggtagcatc
gcccggccgatcagtgaagccgccagtgtcgcccgcaccattcgccttggcgatttttcc
aagcggatgcaatatcagtcaggggatgaagtcggccaactcgccgatgcactcaatgag
atgagcgccagcctcaatgatcgcgccggattagcgaagcggatcagcgaaggggatctg
accgttaatgtagaactcgcctccagcaatgaccaactggggcaagcgctgcgagagatg
gtggcacatttaagccagttggtgcgacagatccaagacacctcgcaaagcattgctgac
aactccacccaagtgtcaaatctcagtgaagtgttgtccgatggcgccatgcagtcggca
tcatcgataacccagatgggcgcggcgatggtagaaatatctagccagacatccgccaac
gccgataacgccgacaaagccaaccgcttctccaatgaatccacaaccgccgcagaaaaa
ggcgcaagccatatggaagagatggtcgccgcgatgaaagcgatccacgactccggcgaa
cggatccatcagatcatcaatgcgattgatgaaattactgcacaaaccaacttgctggca
ctgaacgcagcaatcgaggcggcgcgcgcaggtgatgcaggccgaggctttgcggtggtc
gccgatgaagttcgccagttggcgcaacgcagtgctgatgcagcaagtgatgccgccaag
ttgattgatgaaagctcggccaatacccagtctgggattgccatttcacagcgtactgca
gaagccctcacccaaatccgcgcctctaccgcagaggtatcggcgttggtggccaatatt
gcagtggcctcagaggagcaagtacaagggattaacgagaccacaactggcctgaatcag
gtagatggtgtcacccagcgcaacagcgaaaacgccatggcctgtaaagaatcagcctcg
gaactgttacgccaatccacacaactgaaaaatttggtagcacgctttaaagtgaactaa

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