Sulfobacillus acidophilus TPY: TPY_1694
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Entry
TPY_1694 CDS
T01576
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
say
Sulfobacillus acidophilus TPY
Pathway
say03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
say00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPY_1694 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
say03019
]
TPY_1694 (pnp)
03016 Transfer RNA biogenesis [BR:
say03016
]
TPY_1694 (pnp)
Enzymes [BR:
say01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TPY_1694 (pnp)
Messenger RNA biogenesis [BR:
say03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TPY_1694 (pnp)
Transfer RNA biogenesis [BR:
say03016
]
Prokaryotic type
tRNA degradation factors
TPY_1694 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
AEJ39875
LinkDB
All DBs
Position
complement(1592433..1594649)
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AA seq
738 aa
AA seq
DB search
MAIHTTEFSVGGRVMTLETGRMARQANGSVLVRYGDTAVLVTAVASKAPRAGIDFFPLTV
DFEERLYAVGKIPGGYIKREGRPSESAILAARLTDRPIRPLFPDGFRNDVHVVVSVLSVD
HDYSPEICGMIGASAALTISDIPFEGPIGAVEVGLVDGELVINPTSEQSQRSRLHLTIAG
TDEAVLMIEAGADIVPEDVMLNAILFGHEEIRRIIQGIRQFQVAAGKPKGEYPLFLPSPE
LVARVEEVAETRLAEAMRWADKLEREARIDAVNQEVSAQLLEEFPEQAEMIPAVLKKVLK
KVVRRAIIHEGIRPDGRGFKEIRPLSIEVGVLPRVHGTGLFTRGQTQALTAMTLGPLSDQ
QMLDGIGEEESKRYMHHYNFPPFATGETGPMRGPNRRAIGHGALAERALEPVIPSEAEFP
YALRLVSDILESNGSSSMASVCGSTLALMDGGVPIKAPVAGIAMGLVKDESGYAILTDIQ
GLEDFLGDMDFKVAGTREGITAIQMDIKIHGLDRNILTEALQQAREARLFILDKMAEVIP
APRRELSPHAPRIITMHIDPDKIREVIGPGGKTINRIIDATKVRDKKVEIDIEDDGTIYI
AAVNQEAGERAMTMIEELTRTVEVGQVYTGKVTRLMNFGAFVEILPGKEGLVHISQLAHH
RVAKVEDVVQPGDTLTVKVVEIDNMGRINLSHKDVLPPPEAQERAANDATPAGRPMGPRE
RPNDRRPPRTHGPRRDHR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcacacaaccgaattttcggtcggtggccgtgtgatgactttggaaaccggt
cgcatggcccggcaagccaacgggtccgtgttggtgcgctatggggacacggccgtattg
gtgactgccgtggcatcgaaagcgccacgggccggcatcgatttctttccactcacggtc
gattttgaagaacgcctctatgcggtcgggaagatccccggcggctacattaaacgcgaa
ggtcggcccagtgaatcggcgattttagccgcccgcttgaccgatcggccgattcgtccg
ttatttccggacggatttcgcaacgacgttcatgtggtggtcagcgtgctgtccgtcgat
catgactattcccccgaaatttgcggtatgatcggggcatcggctgccctcacgattagc
gacatcccgttcgaaggtccgattggggctgtcgaagtcggattagtggatggggaactg
gtgattaatccgacctccgaacaatcgcaacgcagtcggttgcatttaaccattgccgga
accgacgaggctgttttaatgattgaagcgggagccgatatcgttcccgaagatgtgatg
ctgaacgcgattttgttcggtcacgaagagattcggcggattattcagggcatccggcag
tttcaggtcgccgccggcaagcccaaaggggaataccccttgttcctgccctccccagaa
ttggtggcacgggtggaggaagtcgccgagacccgattggcggaagccatgcgctgggcc
gataagctggagcgagaggcccgtatcgatgccgtcaatcaagaggtttccgcccaactg
ctggaggaattccccgagcaggcggaaatgattcccgcggtcttaaagaaagtgttgaaa
aaagtggttcgccgggccattattcatgaaggcatccggccggatggacggggattcaag
gaaattcggcccctatcgatcgaagtgggcgtcttaccgcgggttcatggaaccggtctc
tttacccgaggtcaaacccaggcattgacggccatgacgttaggccctttatcggatcag
caaatgctggacggcatcggggaagaagaatcgaaacggtacatgcatcattacaacttc
cctccgtttgcgaccggcgaaaccggtccgatgcgcggacccaaccgacgggccatcggg
catggtgctctagccgaacgggcactggaaccggtcatcccctccgaagcggaatttccc
tacgcgttacggttagtgtccgacattttagagtctaacggatccagctcgatggcttcc
gtttgtggcagcaccttagccctcatggacggcggcgtacccatcaaagccccggtcgcc
ggaatcgcgatgggcctcgtcaaagacgagagcggctatgccattttgacggatattcaa
gggctcgaagactttttaggggacatggactttaaagtcgccggcacccgcgaaggtatt
accgcgatccaaatggatatcaaaatccatggcttagatcgcaatattctcacggaagcg
ttacaacaagcccgagaagccaggctctttatcctggacaaaatggccgaggttattccg
gcccctcgccgtgaactgtcgccgcatgcgccgcgcatcatcacgatgcatattgacccg
gataaaatccgcgaagtcatcggccccgggggtaaaaccatcaaccggattattgacgcc
accaaagtgcgggacaagaaagtggaaatcgacatcgaggacgacggcaccatctatatt
gccgccgtcaaccaggaagccggcgaacgggcaatgaccatgattgaagaactgacccgg
accgtcgaagtgggccaggtttataccgggaaagtcacccgcttgatgaatttcggggca
tttgtcgagatcttgcccggcaaagagggtctggtgcacatttcccaattggctcatcat
cgtgtggccaaagtcgaagacgtcgtgcagcccggcgatacgctgacggtcaaggtcgtc
gaaatcgacaacatgggacgcatcaacctctcgcacaaagacgtcctgcctcctcccgaa
gcgcaagaacgggcggccaatgacgccacccctgccggacgccctatgggcccgcgggaa
cgccccaatgaccgacgaccgccacgcactcacgggccgcgccgggatcatcggtaa
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