Sulfurospirillum barnesii: Sulba_1015
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Entry
Sulba_1015 CDS
T02139
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
sba
Sulfurospirillum barnesii
Pathway
sba02020
Two-component system
sba02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sulba_1015
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sulba_1015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sba03021
]
Sulba_1015
Transcription machinery [BR:
sba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sulba_1015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Lip_prot_lig_C
MS_C
Motif
Other DBs
NCBI-ProteinID:
AFL68314
UniProt:
I3XWJ0
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All DBs
Position
983110..984336
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AA seq
408 aa
AA seq
DB search
MRSINLEFKQKQSLNLSLKLWLPLLQLPLQELSTHLETLSYENPFLEVKRPFEQNLASSH
GIIEELVLGSESLHEKIIEQISPPLFPTPISQKVAHEILCDINEEGYFDGDIDAIAQMCG
VYTEYVERIRLRFSKLEPYGVGARDAHESFVFQLDALSDDMDDELYHLVLNMIEQMARVD
KFSRHGRFEEAKAVIKKFSNPPALEYQATPKQIIPDFYVEVDDDIRLRINNDYYPDVLIL
DPFSSKNESIKEKLKEARDIVNLLELRKTTLYKVVLLVVERQLSFFVGGELRPLNMAHIA
EELSFAESTISRAISNKYIESKQGIFPLKSFFTNAVATKELSSSEIKNFINQQIEYEDKS
EPLTDDELLERIEKRFNIKMVRRTITKYRKLMNVASSKERKKIYKVQA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtatcaacctagaattcaaacagaagcagagtttaaatctctctttgaagctt
tggctcccattgttacaactacctcttcaagagttgagtacgcatttagaaacactatcg
tacgaaaacccttttttggaagtgaaacgcccttttgagcaaaatctagcatcgagccat
ggcatcattgaagagcttgttttaggcagtgaatctttacatgaaaaaattattgagcag
atttccccacccctttttcccacgcccatttcgcaaaaagtagcgcatgaaattttatgt
gacatcaatgaagagggctattttgacggtgatatagatgctattgcacagatgtgtggg
gtttatacggaatatgtagagcgcattaggctacgtttttcaaagttagaaccatacggt
gtcggagcacgtgatgctcatgagtcttttgtgtttcaactcgacgcactcagcgatgat
atggacgatgagctttatcatttggtgttaaacatgatagagcagatggcaagggttgat
aaattttcaaggcatgggcgttttgaagaggcaaaagcggtgattaagaagttttcaaat
cctcctgcacttgagtatcaagcaacgcctaaacagattattcctgatttttatgtggaa
gtagacgatgatattcggttgcgtattaacaacgattattatcctgatgtactcatctta
gaccccttttcaagtaaaaatgagagcatcaaagagaagctcaaagaggcacgtgatatt
gtcaatcttttggaactgcgtaagacaaccttgtataaggttgtgcttttagtggtcgag
aggcaactctctttttttgttggcggtgagttaagacctcttaatatggcgcatatcgca
gaagagctctcttttgcagaatcgaccatttcacgggcgatttcaaacaaatacattgaa
tccaagcagggcattttccccctaaaatcgttttttaccaatgccgttgcgaccaaagag
ctctcttcgtctgagattaaaaattttatcaatcaacaaatcgaatacgaagacaaaagt
gaaccgctcacagatgatgagctcttagagcgtattgagaagcgctttaacatcaaaatg
gtcaggcgtaccatcacgaagtatcgaaaattgatgaacgtcgcatcttctaaagagcgt
aaaaaaatttataaggtacaagcatga
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