KEGG   Abyssicoccus albus: BVH56_05830
Entry
BVH56_05830       CDS       T04690                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sbac  Abyssicoccus albus
Pathway
sbac03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sbac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BVH56_05830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbac03400]
    BVH56_05830
Enzymes [BR:sbac01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BVH56_05830
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BVH56_05830
DNA repair and recombination proteins [BR:sbac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BVH56_05830
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Zn_Tnp_IS1595 Rep_fac-A_C
Other DBs
NCBI-ProteinID: AQL56471
LinkDB
Position
complement(1124600..1125469)
AA seq 289 aa
MPELPEVQLVVDDLKTIEGYTIESISLSDRIKLSHRQGKMAVVKHENLQQFEQSLIGQKI
NTIERRGKYIVMQLTNPINDKVVIAHLGMSGRFEINTNRVSSIPHTHTTFELNYETKTVY
LHYIDPRRFGELRVLDYINEFKPFQQMAPEPFGIEGEAYFIDRFKQFKLNRSTISIKQFI
MDAENVVGCGNIYANEALFICRIHPLRKVHVLTERKMRELYKEIVKLFIKSIERGGSSIH
SYVHMDGEIGSMQDEFFIYQKEVCPICQKKVTSRRINQRNSFYCTNCQK
NT seq 870 nt   +upstreamnt  +downstreamnt
atgccagaattaccagaagtgcaactcgtcgtcgatgatttgaaaacgatcgaagggtat
acgattgaatcaatctcattatcagatcgaattaaattgagtcatcgtcaagggaagatg
gcagtcgttaaacatgaaaatcttcaacagtttgaacaatcattaatcggacaaaaaatt
aatacgattgagcgacgtggaaaatatattgtgatgcaactgacgaaccctataaatgat
aaagtagttattgcgcatttagggatgagtggtcgttttgaaataaatacaaatcgagta
tcatcaattcctcatacgcatacaacatttgaattaaattatgagacgaaaacagtgtac
ttacattatattgacccgagacgattcggtgagttaagagtgctagattatatcaatgag
ttcaaaccatttcaacagatggcaccagagccgtttggcattgaaggggaagcgtatttt
attgatcgatttaagcaatttaaactcaatcgatcaacgatttcaatcaagcagtttata
atggatgcagaaaatgttgtcggttgtggaaatatttatgcaaatgaagcattgttcatt
tgccgtatacatccacttcgaaaagtacatgtgttgactgaacgtaaaatgcgtgaactt
tataaagaaatcgtaaaactatttattaaaagtatcgaacgaggaggctcatcgattcat
agttatgtccacatggatggtgaaatcggttcaatgcaagatgaattttttatttatcaa
aaagaggtatgtcctatatgtcagaaaaaagtgacgtcacgtcgtattaatcagcgaaat
tcattttattgtacaaattgtcagaagtaa

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