Abyssicoccus albus: BVH56_05830
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Entry
BVH56_05830 CDS
T04690
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sbac
Abyssicoccus albus
Pathway
sbac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BVH56_05830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbac03400
]
BVH56_05830
Enzymes [BR:
sbac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BVH56_05830
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BVH56_05830
DNA repair and recombination proteins [BR:
sbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BVH56_05830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_Tnp_IS1595
Rep_fac-A_C
Motif
Other DBs
NCBI-ProteinID:
AQL56471
LinkDB
All DBs
Position
complement(1124600..1125469)
Genome browser
AA seq
289 aa
AA seq
DB search
MPELPEVQLVVDDLKTIEGYTIESISLSDRIKLSHRQGKMAVVKHENLQQFEQSLIGQKI
NTIERRGKYIVMQLTNPINDKVVIAHLGMSGRFEINTNRVSSIPHTHTTFELNYETKTVY
LHYIDPRRFGELRVLDYINEFKPFQQMAPEPFGIEGEAYFIDRFKQFKLNRSTISIKQFI
MDAENVVGCGNIYANEALFICRIHPLRKVHVLTERKMRELYKEIVKLFIKSIERGGSSIH
SYVHMDGEIGSMQDEFFIYQKEVCPICQKKVTSRRINQRNSFYCTNCQK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtgcaactcgtcgtcgatgatttgaaaacgatcgaagggtat
acgattgaatcaatctcattatcagatcgaattaaattgagtcatcgtcaagggaagatg
gcagtcgttaaacatgaaaatcttcaacagtttgaacaatcattaatcggacaaaaaatt
aatacgattgagcgacgtggaaaatatattgtgatgcaactgacgaaccctataaatgat
aaagtagttattgcgcatttagggatgagtggtcgttttgaaataaatacaaatcgagta
tcatcaattcctcatacgcatacaacatttgaattaaattatgagacgaaaacagtgtac
ttacattatattgacccgagacgattcggtgagttaagagtgctagattatatcaatgag
ttcaaaccatttcaacagatggcaccagagccgtttggcattgaaggggaagcgtatttt
attgatcgatttaagcaatttaaactcaatcgatcaacgatttcaatcaagcagtttata
atggatgcagaaaatgttgtcggttgtggaaatatttatgcaaatgaagcattgttcatt
tgccgtatacatccacttcgaaaagtacatgtgttgactgaacgtaaaatgcgtgaactt
tataaagaaatcgtaaaactatttattaaaagtatcgaacgaggaggctcatcgattcat
agttatgtccacatggatggtgaaatcggttcaatgcaagatgaattttttatttatcaa
aaagaggtatgtcctatatgtcagaaaaaagtgacgtcacgtcgtattaatcagcgaaat
tcattttattgtacaaattgtcagaagtaa
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