Sphingobacterium bambusae: SCB77_08405
Help
Entry
SCB77_08405 CDS
T09645
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sbam
Sphingobacterium bambusae
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbam03016
]
SCB77_08405
Enzymes [BR:
sbam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SCB77_08405
Transfer RNA biogenesis [BR:
sbam03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SCB77_08405
Prokaryotic type
SCB77_08405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
WPL50469
LinkDB
All DBs
Position
complement(1972682..1973596)
Genome browser
AA seq
304 aa
AA seq
DB search
MTRFEVLILGNSSATPMYGRHPTSQVLNFNEQLFLIDCGEGTQMQLFRYGIRSTKINHIF
ISHLHGDHYLGLIGLLSSQHLVGRQADLHLYGPAALKEIIDLQFKHSDTQLRYNLVFHPT
NPHQPELILDTVALKVSSFPLLHRIDCTGFRFDEGKRSAVLRTEKVQQMQVPVAYLKLLK
RGIDCVDKNGTVYKAAELTFPPPAARSYAYCSDTVMNEAYFESIQAVDLLYHESTFLHDM
VDRAKETFHTTSLEAAQVAQTVGAKKLLLGHYSARYKDLQPLLEESSTVFPRTALSEEGK
WFPV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacgagatttgaagttttgatattgggcaatagctcggcaacacctatgtacggtcgg
catccgacatcccaagttctgaatttcaacgaacagctttttttaatcgattgcggggag
gggacgcagatgcagctttttcgctacggtattcgaagtacaaaaatcaatcatattttt
atcagccatctacatggcgatcattatttaggcctaataggattgctctcttcgcaacat
cttgttggtcggcaagcggacctccatctatatgggccagcggcactcaaagaaatcatt
gatcttcagtttaagcattcggatacccaattgcgttataacttggtctttcatccaacg
aatccccatcagccagagttgattctggataccgtggccttgaaggtgagcagctttccc
ttgttgcatcgaatagactgtaccggatttcggtttgacgaagggaaacgctcagccgtg
ctacgtacggaaaaggtgcagcaaatgcaggttcctgtagcctacttgaaactgttgaaa
cgaggtatcgactgtgtcgataagaacgggacggtatacaaggctgccgagttgaccttt
ccgccaccggcggcgcgcagttacgcctactgctcggatacggtgatgaacgaggcttat
ttcgagtctattcaagcggttgatctgctgtaccatgagtctacttttttgcacgatatg
gtagatcgcgccaaggagacatttcataccaccagcctagaggctgcgcaggttgcacaa
accgtgggggcaaagaagttgttgctaggtcattactctgcgcgctacaaagatttgcaa
ccgctgttggaggaaagcagcactgtttttccacggacggcactttcggaagaaggaaag
tggtttcccgtgtaa
DBGET
integrated database retrieval system
