Sphingobacterium bambusae: SCB77_18910
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Entry
SCB77_18910 CDS
T09645
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam00541
Biosynthesis of various nucleotide sugars
sbam01100
Metabolic pathways
sbam01250
Biosynthesis of nucleotide sugars
Module
sbam_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SCB77_18910 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sbam01005
]
SCB77_18910 (kdsB)
Enzymes [BR:
sbam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
SCB77_18910 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
sbam01005
]
Lipid A
SCB77_18910 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
TetR_C_16
PhoQ_Sensor
Motif
Other DBs
NCBI-ProteinID:
WPL48024
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All DBs
Position
complement(4556913..4557650)
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AA seq
245 aa
AA seq
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MKIIGIIPARYASSRFPGKPLADIGGKSMIQRVYEQVKGCASLAEVVVATDDQRIEEHVR
SFAGNVIMTSTEHESGTDRCAEVVSKINGFDVAINIQGDEPFINPLQIDLLCSLFNDPKT
DIGTLIKKIDKQEDLFSENTPKVIVGSEQQALYFSRQTIPFLRGIPNAEWLRKHNFYKHI
GVYGYKTAVLQEITRLPISSLEKAEALEQLRWLENGYRIRVAETAYDTVAVDRPEDLETI
KRTFF
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattataggaatcattccggcgcgctatgcttcatcgcgtttcccaggcaagccc
ttggcggatataggtggaaaatcgatgatacagcgtgtgtacgaacaggttaaaggttgc
gcgagtctggcagaagttgttgtggccacggacgatcaacgcatcgaagaacacgtacgc
tcttttgctggcaatgtaatcatgacttccactgaacatgagtcaggcacggatcgctgc
gcagaagtggtatcgaaaattaatggatttgacgtagccattaatattcaaggcgacgaa
cctttcatcaatccgttacaaatcgatcttctatgttccctttttaatgatccaaaaaca
gatatcgggacgcttattaagaaaattgacaaacaggaggatctctttagtgaaaatact
ccaaaagtaatcgtcggaagcgagcaacaagcgctgtacttttctagacaaacgatcccc
ttcttacgcggaataccaaacgccgagtggctgcgtaaacataacttttacaaacacatt
ggtgtctacggctataagacagcggtgttgcaagagatcaccagattgcctatctccagt
ttagaaaaagcagaggcattggagcagctgcgttggctggaaaacggctaccgtatccgt
gttgcggaaacagcatacgataccgtcgctgtagatagaccagaggacttagagacaata
aaacgtaccttcttctag
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