KEGG   Sphingobium baderi: ATN00_08025
Entry
ATN00_08025       CDS       T04194                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
sbd  Sphingobium baderi
Pathway
sbd00300  Lysine biosynthesis
sbd00470  D-Amino acid metabolism
sbd01100  Metabolic pathways
sbd01110  Biosynthesis of secondary metabolites
sbd01120  Microbial metabolism in diverse environments
sbd01230  Biosynthesis of amino acids
Module
sbd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sbd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    ATN00_08025
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    ATN00_08025
Enzymes [BR:sbd01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     ATN00_08025
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ALR20262
UniProt: A0A0S3EXU5
LinkDB
Position
1606726..1607991
AA seq 421 aa
MDHFDYLDGAMHVEQVPMAAIADAVGTPVYVYSTATLTRHVGVFRDALSALDNPLIAFAV
KANPNAAVLATLAKLGLGADVVSGGELLRAIAAGIPADRIVFSGVGKTADEMRLALEHGI
FQFNLESEPEAEMLSDVALSMGKRAPVAYRINPDVDAGTHAKISTGKSENKFGIPYDRAL
DSYAAARDLPGLDVQGVAVHIGSQLTDLAPLEAAFVKVGALIGKLREAGHDIRTADLGGG
LGVPYDPSKPVPPSPADYGAMVTEVTQGWNVRLMFEPGRVIVGNAGALLSRVVRVKQGAQ
APFVIVDAAMNDLLRPSLYDAWHDIRAVQPAGSRGAANVVGPVCETGDTFAMHRDMDVVQ
ADDLVAFMTAGAYGATMASTYNSRALTPEVLVSGDKWAVVRARPPIETLIAGDSIPDWVR
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
ttggaccatttcgattatctggacggcgccatgcatgtggagcaggtgcccatggccgcg
attgccgatgccgtgggcacgccggtctatgtctattcgaccgcgacgctgacgcgccat
gtcggcgtgtttcgcgatgcgctgagcgcgctcgacaatccgttgatcgcctttgcggtg
aaggccaatcccaatgcggcggtgctggcgacgctcgcgaaattggggctgggcgcggac
gtggtttcgggcggagaattgctgcgcgccatcgcggcggggatacccgccgaccgcatc
gtcttttcgggcgtgggcaagacggccgatgaaatgcggctggcgctggagcatggtatt
ttccagttcaatctggaaagcgaaccggaagcggagatgctctccgacgtggccctttcc
atgggcaagcgcgcgccggtggcctatcgcatcaacccggacgtggatgcaggcacccat
gccaagatttcgaccggcaagtcggagaacaagttcggcatcccctatgaccgggcgctg
gattcctatgcggcggcgcgtgatctgcccggtttggacgtgcagggcgtggcggtgcac
atcggcagccaactgaccgatctcgcgccgttggaggcggccttcgtcaaggtcggcgcg
ctgatcggcaagctgcgggaggcagggcatgacattcgcaccgccgatctgggcggcggg
cttggcgtgccctatgatccgtccaagcccgtgccgcccagccccgccgactatggcgcg
atggtgactgaggtgacgcagggatggaacgtccgcctgatgttcgagccgggacgcgtg
atcgtcggcaatgcgggtgctctgctgtcgcgcgtggtgcgggtgaagcagggcgcgcaa
gcgcctttcgtgatcgtcgatgcggcgatgaacgacctgttgcggcccagcctctatgat
gcatggcatgatattcgcgccgtgcagcccgccggcagcaggggggctgccaatgtggtg
gggccggtgtgcgagacgggcgatacctttgcgatgcatcgcgacatggatgtggtgcag
gcggacgatctggtcgccttcatgacggcgggggcctatggcgcgaccatggcgagcacc
tataacagccgcgcgctgacgcccgaagtgctggtgtcgggcgacaaatgggccgtggtg
cgcgcgcgtccgccgatcgagacgttgattgccggggacagcatccccgattgggtcaga
gactga

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