Sphingobium baderi: ATN00_13525
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Entry
ATN00_13525 CDS
T04194
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sbd
Sphingobium baderi
Pathway
sbd00550
Peptidoglycan biosynthesis
sbd01100
Metabolic pathways
sbd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ATN00_13525
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ATN00_13525
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbd01011
]
ATN00_13525
Enzymes [BR:
sbd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ATN00_13525
Peptidoglycan biosynthesis and degradation proteins [BR:
sbd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ATN00_13525
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ALR22630
UniProt:
A0A0S3F4F3
LinkDB
All DBs
Position
complement(2754493..2756562)
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AA seq
689 aa
AA seq
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MKFPRSKRKIVTEATQSFTFTRRAMVVGGLQGGFGLLLAGRMAWISVAENEKYKLLSESN
RVNLTLIPPRRGWIIDRNGRPLANNRTDFRVDLIPERVKDAEGTIRSLAALLALESDEIE
RIKEELDKSPGFRPVQVADKLTYDQYAAVSVRLPDLPGVAPSQGFSRYYPAGASVGHLLG
YVGAASAKEYEERKDPLLITPGFKVGKDGLERSFDRELTGKPGAKRVEVTARGKIVRELT
TRPDMPGNTIRLTIDAGLQEYAGRRLATQSGSVVILDCRNGDVLAMASMPSFDPNSFSDG
ISHLEWEMLSKDDHVPLRNKTLQGLYPPGSTVKPMVALALLEAGVQPSETVTCAGAIRVG
NTLFHCHKRRGHGAVNMRTAIAQSCDIYFYQMAQRIGMDRIASMARRVGMGQKFPLPFPS
QSYGTVPDPAWKLKKYGQQWQVYDTVNATIGQGYMLINPLQMAVMAARLATGRQLMPNFI
HGADRPEAEPVGVNEGHLVVIRDAMSAVVNGGGTGGAARMNIPGVMIAGKTGTAQVRRIS
MSERAGGVRGNASLPFKLRDHALFQGFVPFDNPRYAVGCIIEHGGHINRVEDAPMICSDT
LSFLFDPKKATEKLETLEKGWGGTPAERLARQTAAFRLSNAIKKGEVPAPEASNAAHATT
PPMSSVPGTAPEDDNDAPPPPGSNPASAP
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttccccgttccaagcgcaagatcgtcacggaagccacccagtccttcaccttc
acgcgtcgggccatggtagtgggcgggctgcaaggcggttttggcctgttgctggctgga
cgcatggcgtggatcagcgtggcggagaatgagaaatacaagctcctgtcggaaagcaac
cgcgtcaatttgacgctcattccgccgcgtcgtggatggatcatagacaggaatggccgg
ccgctggccaataaccgcaccgatttccgtgtcgacctgatccctgagcgggtgaaggat
gccgaaggcaccatccgcagccttgccgcactgctggcgctggagtcggatgaaatcgag
cggatcaaggaagagttggacaaatcgcccggattccgcccggtgcaggtcgcggacaag
ctgacctacgatcaatatgctgccgtcagcgtccgcttgcccgacctgcccggcgtcgcg
cccagccagggcttttctcgctattatccggcgggagcgtccgtggggcatttgctgggc
tatgtcggcgcggcttccgccaaggaatatgaagaacgcaaggacccgctgctcatcaca
cctggcttcaaggtcggcaaggatggtctggaacggtcgttcgatagggaactgaccggg
aaaccgggcgccaagcgggtcgaagtcacagcgcgtggcaagatcgtgcgtgaactgacc
acccggccggatatgcccggcaacaccatccgcctgacaattgacgccggattgcaggaa
tatgcgggccggcgccttgccacgcagagcggttccgtcgtcattctcgattgccgcaac
ggcgatgtgctggccatggcgtccatgcccagtttcgatcccaacagtttttccgacggc
atcagtcacctggaatgggaaatgctgtcgaaggacgatcatgtcccactgcgtaacaaa
acgttgcaggggctatatccgccgggctctaccgtcaaacccatggtagcgctcgcacta
ctggaagcgggtgtccaaccgtccgaaacagtgacctgcgcgggcgcgatcagagttggc
aacacattgttccactgccacaaaaggcgcggtcatggcgcggtcaacatgcggaccgcc
attgcccaaagctgcgacatctatttctatcagatggcccagcgcattggcatggaccgg
atcgccagcatggcgcgacgcgtgggcatgggacagaaattccccctgccctttcccagc
cagagctatggaacggtgccggaccctgcctggaagctcaagaaatatgggcagcaatgg
caggtatatgacacggtcaatgccaccatcggtcagggctatatgctgatcaacccgctc
cagatggcggtgatggcggcgcggctggccacgggcaggcaactcatgcccaatttcatc
catggcgccgatcgccccgaagccgagccggtcggcgtcaatgaaggccatctggtcgtc
atccgcgacgcgatgagcgcggtggtgaacggcggtggaacgggtggcgcggcgcgtatg
aacatcccgggagtgatgatcgccggtaaaaccggcacagcccaagttcgcagaatctcc
atgtccgaacgcgcaggcggcgtacgcggcaatgcctccttgcccttcaagctgcgcgac
cacgccttgtttcagggcttcgttccattcgacaatccgcgctacgcggtgggctgcatc
atcgagcatggcggtcacatcaaccgggttgaagacgcgccaatgatctgtagcgatacc
ttgtccttcctcttcgacccgaagaaagcgacggaaaagctagaaacgctggaaaaaggc
tggggcggcacgcccgcagagcgtctggcgcggcaaaccgccgcgtttcgcctttccaat
gcaatcaagaagggtgaagtcccagcccccgaagccagcaatgcggcccacgcaaccaca
ccgccaatgtcgtctgtgcccggcacggctccggaagacgataatgatgcgccgccgcct
ccgggctcaaatccggccagcgcgccatga
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