Sphingobium baderi: ATN00_13840
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Entry
ATN00_13840 CDS
T04194
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbd03400
]
ATN00_13840
Enzymes [BR:
sbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATN00_13840
DNA repair and recombination proteins [BR:
sbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ATN00_13840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DUF2800
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALR21212
UniProt:
A0A0S3F0M8
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All DBs
Position
2836799..2840209
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AA seq
1136 aa
AA seq
DB search
MAATMVRKVSSLQPLAGEQALAAAPDAHVWLSASAGTGKTHVLTARVFRLLLQGVRPENI
LCLTFTKAGAAEMADRVHDRLAAWVQMEEPDLFNDLAALGEDGGPEARDRARRLFAEVLE
STGGGLRIQTIHGFCQQLLTSFPLEAGLTAGFRPLDQREQASLARQVLADIAVEADENGD
VALTSALQALSLRLGEAGAEHFLLRSAARLDALNGLPEDIGPWLMAALELPAGDIDQWLA
LQCDDAIFDVRTLTAIAQANADWGTGRGLERCQRIARWRALAPLERAASLPDLHTAWAKA
DGDLISAKGWVPPVDGYLEMTAPMRERCAELIGVKLLADYAKLLVSALHAGRAYARAYAR
AKEMAGAVDFDDLIARTATLLQQDGIADWIRYKLDQRIDHILVDEAQDTNVSQWQIIGAL
TSEFFAGEGAKGDRVRTLFTVGDFKQAIFGFQGTSPVAFAAAQKAFQKHATDVAHPFHTL
SLDRSFRSTPAILEVVDSMIATLQADRLGLEDQDVRHISANRFPGEVLLWKPIVAGLNED
TEGEEDWAADQERVLAGRIARQIRQWLDEGLMLESKGRPVRPGDIMILVRRRSELARLIV
ARLYEEQVAVAGIDRLRLNAPLAVRDLLAALRFAVQPEDELNLAALLVSPLIGWSQDELM
TRLIGRDRKTGLWRHLTATLDEDLVRPLRDLLATADFTTPYRYLEAILSGSMDGRRRLIE
RLGPEAVDPIEELLNAALAFEIDDYPSLQRFIDWFDRGEVEIVRDAAAQGDALRLLTVHG
AKGLQAPIVILADACLDPDAGHRADALEWNGLPILPPRKEERRGPIGQVAEEAANADREE
HWRLLYVALTRAEEKLVVAGSLGPRAKGEVKAESWFGAVENALISLDAEWEADPLWGARR
RWRGMETLPPKPLQPIHAEEKALVDKPAWLNRPAPIEARPPRPLAPSASVEDDAPYPPPS
LAMRAAAERGRWLHALFEQLPDIAPARRRESAERWLEQQGVADASMRREIVDHVLAVIEM
PGFSALFGPGSLAEAPIAAVVGEAVIAGTVDRLCISDDLIQVVDFKTGRIAPLAVEEVPV
AHIRQMAAYVSALRVIFPKRTIEAGLLYTNAPRLISLPQDLLEANKPGFAAAQDNL
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgacgatggttaggaaagtaagctcacttcagccgctcgccggggagcaggcg
ctggcggcggcgcccgacgcgcatgtctggctgtcggcttcggcgggcacggggaagacc
catgtgctgacggcccgcgtctttcgcctcttgcttcagggcgtgcggccggaaaatatc
ctctgtctcacttttaccaaggccggggccgctgaaatggcggatcgtgtccatgaccgg
ctggcggcatgggtgcagatggaagagcccgatctcttcaacgacctggctgcattggga
gaggatggggggccggaggcacgcgaccgcgcccgccggctctttgccgaagtgctggaa
tcgacaggcggcggtttgcgtatccagacgatccatggcttttgccagcagttgctgacc
tcttttccgttggaagcggggctcacggccggtttccgtccgctcgatcagcgggagcag
gcttccctcgcgcggcaggttttggccgacatcgcggtggaggcggacgagaatggagac
gttgcccttacgtccgcattgcaggcactcagcctgcgattgggagaggcgggggcggag
cattttctcctgcggagcgcggcgcgtctggatgctctcaatggcttgccggaggatatc
ggcccctggctgatggccgcccttgaactaccggccggcgatattgaccaatggttggcg
ctgcaatgcgacgacgccatttttgacgtgcggaccctgaccgctatcgcgcaggccaat
gcggattggggcacggggcgcgggttggagcgatgccaacgcattgcgcgatggcgtgcc
cttgcaccactggagcgcgccgcgtcgttgcccgatctgcataccgcatgggccaaggcg
gacggcgatctcatctccgccaagggctgggttcctccggtcgatggctatctggagatg
accgcgccaatgcgcgagcgttgcgcggaattgatcggcgtcaagctgctcgccgattat
gcgaaattgcttgtcagcgcgttgcacgctggccgcgcctatgctcgcgcctatgcccgg
gcgaaggaaatggcgggcgcggtcgatttcgacgatctgatcgcccgcaccgctaccctc
ctgcaacaggacgggattgcggattggatacgttacaagctggaccagcgcatcgatcac
atattggtcgatgaagcacaggacaccaatgtcagccaatggcagatcataggtgcgctg
acttcggaatttttcgcgggcgaaggcgcgaagggggacagggttagaaccctctttacg
gtcggcgatttcaagcaagcgatcttcggctttcagggcaccagccctgtcgcctttgcc
gccgcccagaaggctttccagaaacatgcgacggatgtggcgcatcccttccatacgcta
tcgctcgaccgcagtttccggtccacgccagccatattggaggtggtggatagcatgatc
gccactttgcaggccgaccggctcgggctggaggatcaggatgtccgccatatcagcgcc
aatcgctttcccggcgaagtcctgctctggaaaccgatcgtcgcgggcctgaacgaggat
acggaaggggaggaggattgggctgccgatcaggagcgggtgcttgcaggccggatcgcc
cgtcagatccggcaatggctggacgaaggcttgatgctggaaagcaaaggcaggccggtg
cgtcccggcgacatcatgatactcgtccgccgtcgcagcgagctggctcgcctgatcgtc
gcgcggttatatgaagaacaggtcgcggtcgcggggatagacaggctgcgtctcaacgcg
ccgctggccgtgcgcgatttgctggcggcgctgcgctttgccgtgcagcctgaagacgaa
ttgaatctggcggccctgctcgtttctccattgatcggatggagccaggatgagttgatg
acgcggctgatcggccgggaccgtaaaaccggattgtggcgccatctgaccgccacgctg
gacgaggatttggtccggccgttgcgcgacctgctggccacggcggatttcacgacgccc
tatcgctatctggaagccattctttccggttcgatggacggacggcggcgcctgatcgag
cggctggggcccgaagccgtcgaccccatcgaggaattgctgaatgcggcgctggccttc
gagattgacgattatccttcgcttcagcggttcatcgactggttcgatcggggcgaagta
gaaatcgttcgtgacgccgccgcgcagggcgacgccctgcgtttgctgaccgtgcacggg
gcaaaaggattgcaggcccccattgtcatccttgcggacgcttgccttgatcccgatgcc
ggtcatcgggcggatgcgctggaatggaatgggttgcccatccttccgccccggaaggag
gaacggcgaggaccgatagggcaggttgccgaagaggctgcgaatgcggacagggaggag
cattggcggctgctttatgtcgccctgactcgtgcagaggaaaagctggtggtagccgga
tcgttggggcctcgcgccaaaggggaggtgaaagcagaaagctggtttggcgcggtggag
aatgccctgatctcactggatgcggagtgggaagccgatccgctatggggcgcgagacgg
cgttggcgtggcatggaaacattgccgccaaagccgttgcagccgatccatgccgaagaa
aaagcccttgtggacaaaccggcttggctgaaccgacccgctccgatcgaggcgcggccg
ccacgcccgctggccccttcggcctcggtggaggacgacgcgccctatccccctcccagc
cttgcgatgcgcgcggccgcggaacgggggcgctggctgcatgcgttgttcgagcagttg
cccgatatcgctccggcccgccgccgcgaaagcgcggaacgctggctggagcagcagggc
gtcgcagatgcttcgatgcggcgggaaattgtggaccatgtgcttgccgttatagaaatg
ccgggtttttccgcgctgttcgggcccggctctctggccgaagcgcctatcgccgccgtg
gtcggcgaagcggttatcgcaggcacggtggatcggctgtgcattagtgacgatctcatt
caggtcgtcgatttcaagaccggccgcatcgcgccgctggccgtggaggaggtgcctgtg
gcccatatccggcaaatggccgcctatgtttcggcattacgggtgattttccccaagcgg
actattgaagccggcctgctttatacgaatgcgccgcgcctcatatccctgccgcaagac
ctgttggaggcaaacaagcccggctttgcggcggcacaggacaatttgtga
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