Fluviispira sanaruensis: JCM31447_05730
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Entry
JCM31447_05730 CDS
T05949
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sbf
Fluviispira sanaruensis
Pathway
sbf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JCM31447_05730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbf03019
]
JCM31447_05730
Messenger RNA biogenesis [BR:
sbf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JCM31447_05730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_NusA_2nd
KH-I_KHDC4-BBP
KH_2
Ndc1_Nup
dUTPase
KH_KhpA-B
AAA_13
Motif
Other DBs
NCBI-ProteinID:
BBH52135
UniProt:
A0A4P2VS92
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All DBs
Position
complement(648020..649594)
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AA seq
524 aa
AA seq
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MGVWEYVLIIAIGIAVAALAFLGVHTMNMRALTQDLKIKHEEAEKRLGEARAQADELVKK
ALREAKELAINEGRDFERAQREKNLEIKKIETRIQKREETIEKKAQQLEQKEKDLKRKME
SIESEEKKVLEALRKAEETVEESKSRLESVARLSQEEAREQLKKAIEVEVRKSASAEIRA
AEEEARRIADEKARGIISTAIQRIANEFVTDATVSVITLPTDDMKGRIIGREGRNIRTIE
QATGVDLIIDDTPEAVIISCFNPIRREIAKTAIERLVADGRIHPARIEEVVQKTRTEFEQ
MIREAGERSSFDCGITGLHPEVIQALGKLKYMTTGGQSVLQHCIETAQIAGIIAAELDLN
VRLTKRAALLHDIGKSLDEESEGNHSHVGALFLQKYGESPEVVEAAAKHHNDNLHGLNAI
TVIVQTANVLSNFRPGARKEFLEKAIDRLRDMESTVEGFDGVEQAYVIKSGREVRAMVSP
TVMDDEAVTLLAKSVAKRLRSELHQAGNIKVTMVREQRATHLAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtttgggaatatgtactgatcatagctatcggaatagctgtggccgccctagcg
tttttgggggttcatacaatgaacatgcgcgccctaacgcaggatttaaagatcaaacat
gaagaggctgagaaaagacttggggaagcccgagcacaagcagatgaactggttaaaaaa
gctctcagagaagccaaagaacttgctataaatgaaggtcgagattttgaacgggcgcaa
agagaaaaaaatcttgaaatcaagaaaatagaaactcgaattcaaaaaagagaagagacg
atagaaaaaaaagctcaacaactcgaacaaaaagaaaaagatttgaagagaaaaatggaa
tctatcgaatctgaagaaaaaaaagttttagaagcactcagaaaagcagaagaaacagtt
gaagaaagcaaatcgcggcttgaatccgttgcccgactctcacaggaagaggcaagagaa
caacttaaaaaagcgatcgaagtcgaagtaagaaagtctgccagtgcagaaattcgcgct
gcagaagaagaagcgagacgtattgccgatgaaaaagcacgcggaattatttccactgct
attcaacggatcgcaaacgaatttgtgacagatgccactgtctcagtcatcactttgcca
acggatgatatgaaaggtcgtatcattgggcgcgaaggacgtaacattcgcacaattgaa
caggccactggagtcgatctaattatcgatgacactcctgaggccgttattatttcctgc
ttcaatcccattcgcagagaaattgccaaaactgctattgaacgtttagttgctgatgga
cgtattcatcctgcgcgcattgaagaagttgtgcaaaaaaccagaacagaatttgaacaa
atgatccgtgaagctggtgaacgttcatcctttgattgcggaataactggcttgcatcct
gaagtcattcaagcgcttggaaaactaaaatacatgacaacgggcggccaatccgttttg
caacactgcattgaaactgctcaaattgcaggaatcattgctgcagaactcgatctcaat
gtgcgcttaacgaaaagagcagctctattgcatgatattggcaagagcttagatgaagaa
tcagaaggaaatcattcgcatgtgggcgcactcttcttacaaaaatatggtgaatcacca
gaagttgttgaagctgcagcaaaacatcataatgataatttacatggtttaaacgccatc
acagtcatcgtacaaaccgcaaatgttctaagcaatttccgtccaggcgcacgcaaagaa
ttccttgaaaaagcaattgatagattgcgtgatatggaatcaactgtcgaaggttttgat
ggcgtagaacaagcttatgttattaaatctggtcgtgaagttcgagctatggtatcaccc
accgtaatggatgatgaagcagtgactttactcgctaagtccgttgcaaaacgcttgcgc
agtgagcttcatcaagcaggcaatattaaagtaactatggttagagaacagcgagcgaca
catcttgcaaaataa
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