Fluviispira sanaruensis: JCM31447_14310
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Entry
JCM31447_14310 CDS
T05949
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sbf
Fluviispira sanaruensis
Pathway
sbf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JCM31447_14310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbf03400
]
JCM31447_14310
Enzymes [BR:
sbf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JCM31447_14310
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JCM31447_14310
DNA repair and recombination proteins [BR:
sbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JCM31447_14310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
BBH52988
UniProt:
A0A4P2VK80
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All DBs
Position
1645147..1645959
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AA seq
270 aa
AA seq
DB search
MPELPEVQNFAQSIQSNYVGKKFKNIIFHRDNLRYPFEKAKLEKIFANGIEFLNCYREGK
QIILQTSNGSVTISLGMTGAFKAANQNEVEKHQHITLNFKNGESLAFVDPRRFGFWKVFD
SKELKKTSCDPLVETDLLELFLSEVVKNKCISVKDMLMDQKLIGGIGNIYALEALFLAEI
LPTTRCVDLSITKWKKLAKEIPIILNQAIALGGSSISTYRSFKGDKGSFQTLHKVYGREN
EKCLKKGCQGNIKRIAQSGRSSWYCPDCQF
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctacctgaggtgcaaaattttgcgcaatccattcagtccaattatgtagga
aaaaaatttaagaatattatttttcatagagataatttaagatatccatttgaaaaagca
aaattagagaaaatatttgctaatgggatcgagtttttaaattgctatcgagaaggcaaa
caaattattctgcaaacttcaaatggttctgtaacaatcagtttgggtatgaccggtgca
tttaaagcagcaaatcagaatgaagttgaaaagcatcaacatattactttaaactttaaa
aatggtgaatctcttgcatttgttgatccaagaagatttggtttttggaaagtttttgat
tcaaaagaactaaaaaaaacgagttgtgatccacttgtagaaacggatcttttagagtta
tttttatctgaagtcgtaaaaaataaatgcatttctgttaaagatatgcttatggatcaa
aagttaattggtggaataggcaatatatatgcactcgaagcgctttttcttgcagaaatt
ttgccaacaactcgttgtgttgatttatcaataacgaaatggaaaaagttagctaaagaa
attccaattatccttaatcaagcaattgctttagggggctctagtatttctacttatcga
tcatttaaaggcgataagggttcattccaaactttgcacaaagtttatggaagagaaaat
gaaaaatgtttgaagaaagggtgtcaaggaaatataaaaaggattgctcagagtgggcgc
agttcttggtattgtcccgattgccaattttaa
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