Sorghum bicolor (sorghum): 110434890
Help
Entry
110434890 CDS
T01086
Name
(RefSeq) xanthine dehydrogenase
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00230
Purine metabolism
sbi00232
Caffeine metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi01232
Nucleotide metabolism
sbi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
110434890
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
110434890
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110434890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
110434890
Enzymes [BR:
sbi01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
110434890
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
110434890
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of breast milk
110434890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Fer2_2
Ald_Xan_dh_C
CO_deh_flav_C
Fer2
Motif
Other DBs
NCBI-GeneID:
110434890
NCBI-ProteinID:
XP_021315441
LinkDB
All DBs
Position
1:61234644..61247827
Genome browser
AA seq
1371 aa
AA seq
DB search
MGSLTRAAEEDPAAAAEEEWSDEAVIYVNGVRRVLPDGLAHLTLLQYLRDIGLRGTKLGC
GEGGCGACTVMVSCYDRITKKSLHFAINACLAPLYSVEGMHIITVEGIGDRQRGLHPVQE
CLAKAHGSQCGFCTPGFVMSMYALLRSSKQPPTEDQIEDCLAGNLCRCTGYRPIIDAFRV
FAKTDNLAYTNSSSENTNDQAICPSTGKPCSCRNETDINVNESSLPSSVERYSPYSYNEI
DGSAYNERELIFPPELQLRKVMPLKLNGFNEIKWYRPLKLKQLLHLKSCYLDAKLIIGNS
EVGVETKFKNAQYNVMISVTHIPELNTLKVKEDGIHIGSAVRLAQLQNFLKKIIAERDLP
ETSSCQAIVRQLKWFAGTQIRNVASVGGNICTASPISDLNPLWIAVGAKFQIIDVNSNVR
TILAKDFFLGYRKVDIKPEEILLSIILPWTRPFEYVKEFKQAHRREDDIALVNAGMRVYL
QEAEGNWIISDVSIVFGGVAAVPLSASRTENFLTGKKLDSGLLDDTFNLLKEDISLSENA
PGGMIEFRRSLTLSFFFKFFLSVTHEMKVKGLLEDGLHADHLSAVQPYSRPVTVGTQSYE
LVRQGTSVGQPMVHMSAMLQVTGEAEYTDDTPTPPNTLHAALVLSKKAHARILSIDDSLA
KSSPGFAGLFLSKDIPGVNHTGPVIHDEEFFASDIVTCVGQIIGIVVADTHDNAKTAANK
VHIEYCELPAILSIEEAVKNGSFHPNTKKCLVKGDVEQCFLSGACDRIVSGQVHVGGQEH
FYMEPQCTLVWPVDSGNEIHMVSSTQAPQKHQKYVASVLGLPQSKVVCKTKRIGGGFGGK
ETRSAIFAAAASVPSFCLRRPVKLVLDRDVDMISSGQRHSFLGKYKVGFTNEGKILALDL
EIYNNGGHSLDLSLAVLERAMFHSENVYDIANIRINGQVCFTNFPSNTAFRGFGGPQGLL
IAENWIHHIATELQRSPEEIKELNFHNDGVVLHYGQLLQNCTIGSVWDELKSSCNFVEAR
KAVNSFNSNSRWRKRGIAMIPTKFGISFTAKFMNQAGALVQVYTDGTVLVTHGGVEMGQG
LHTKIAQVAASSFNIPLSSVFISETSTDKVPNASPTAASASSDLYGAAVLDACQQIKVRM
EPIASKGTHNSFAELAQACYMERVDLSAHGFYATPNIGFDWTIGKGTPFNYFTYGAAFAE
VEIDTLTGDFYTRTADIVMDLGFSINPAIDIGQIEGAFVQGLGWAAMEELKWGDDNHKWI
RPGHLFTCGPGSYKIPSVNDIPLNFKVSLLKGVPNPKAIHSSKAVGEPPFFLGSAVLFAI
KDAIFAARAEEGHLEWFPLDNPATPERIRMACVDSITKKFAGIDYRPKLSV
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgctcacgagggcggcggaggaggacccagcagcggctgcggaagaggagtgg
tccgacgaggccgtcatctacgtcaacggcgtccgtcgcgtgctccccgacggcctcgct
cacctcaccctgctgcagtaccttagagatattggccttcgaggaacaaagcttggatgt
ggtgaaggtggttgtggagcctgcactgtcatggtctcttgctatgaccgaattacaaag
aaatcactgcattttgcaatcaatgcatgcttggctccactttattctgtggaaggaatg
catataatcacagttgagggaattggagatcgacagcgaggtttgcacccagttcaggaa
tgtttagccaaggcacatggttcacaatgtggattttgcacccctggttttgtgatgtct
atgtatgcactgctgagatcgagcaaacagcctcctactgaagaccagattgaagactgc
cttgcaggaaatttgtgtcgttgtactggctaccgaccaattatagatgccttccgtgtg
tttgccaaaacagataatttggcatacaccaattcatcttcagaaaatacaaatgaccaa
gctatctgcccttctactgggaagccatgttcctgcaggaatgagacagatatcaatgtt
aatgagtcctcattaccgtcgtctgtggaaagatattcgccttattcatacaatgaaatt
gatgggagtgcatacaacgagagggaactcatcttccccccagaacttcagttgaggaaa
gttatgccacttaaattaaatgggttcaatgagatcaaatggtataggcctcttaaacta
aagcaattattacatttgaaatcttgctacctggatgcaaagcttatcattggtaactca
gaagtgggagtcgaaacaaagtttaagaatgcccaatataatgtcatgatctcagttact
catattccagagcttaataccctcaaagttaaagaagatggcatacacattggttctgct
gtaagacttgcacaacttcaaaatttccttaaaaagattatagcagaacgtgatttgcct
gaaacttcgtcatgccaggcaatagtacgtcagttaaaatggtttgcaggtacacaaatc
aggaatgttgcatctgttggtggtaacatttgtactgctagtccaatatcagacctaaat
ccactttggatagctgtaggtgcaaaattccagataatagatgtgaacagcaatgttaga
actatccttgcaaaggatttctttcttggttaccgtaaagttgacataaaacctgaagaa
atattgctttctattatcctaccatggacaaggccttttgaatatgtcaaagaatttaaa
caggcacatagaagggaggatgatattgctttggttaatgctggaatgcgtgtgtattta
caagaagctgaaggaaattggataatatctgatgtttcaattgtctttggtggagtagca
gcagttccacttagtgcttcaaggaccgaaaactttcttactggaaagaagttggactct
gggttgctggatgatactttcaatttattgaaagaagacatatctctttcagagaatgca
cctggtggaatgattgaatttcgcagatcgcttactttgagtttctttttcaaatttttc
ctttctgttactcatgaaatgaaagtaaaagggttgttagaagatggattgcatgcagat
catctgtcagctgtacagccttacagtaggcctgttactgttggaactcaaagttatgaa
ttagtaaggcagggaacttctgtaggtcagccaatggttcatatgtcagctatgcttcag
gtcactggtgaggctgaatacactgatgacacaccgacacctcccaatactttgcatgct
gctttggtgctgagtaagaaggctcacgctcgcatattgtctattgatgattcacttgcc
aaatcttcccctggctttgctgggctgttcctttcaaaagacatacccggtgttaaccat
accggaccagttatccatgatgaggagttttttgcatccgacattgttacttgtgttggt
cagatcattggaattgttgttgctgatacccatgataatgcaaaaactgctgccaacaaa
gtacatatcgagtattgtgagctcccagcaattttatctatagaggaagctgtcaagaat
ggaagctttcatccaaataccaagaaatgccttgtaaaaggcgatgtagaacaatgtttc
ctgtctggtgcgtgtgacagaattgtatcaggacaagttcatgttggaggtcaagagcat
ttttacatggaacctcaatgcactcttgtctggccagtggattctggaaatgaaattcat
atggtctcatctactcaagctccacagaagcatcagaaatatgttgctagcgttcttggt
cttccacaatcaaaagttgtttgcaagactaagcgtattggtggcggatttggtggaaaa
gaaaccagatcagcaatatttgctgctgcagcatctgtaccctctttctgtctgagaagg
ccagtaaagcttgttttggacagagacgttgacatgatatcaagtggacagaggcacagt
ttccttgggaaatataaggtgggatttaccaatgaagggaagatactggccctagacctg
gaaatttataacaacggtggccattcacttgatctatcccttgcagtactggagcgtgct
atgtttcattcagaaaatgtctatgacatagcaaacatcagaatcaatgggcaagtatgc
tttacaaacttcccaagtaacactgctttccgaggttttggtggtccacaaggcttgttg
atcgcagagaattggattcaccatatagctacagaactccaacgaagtcctgaggagata
aaagaacttaattttcacaatgatggagttgtgctgcattatggccagttgctccagaat
tgtacaataggttcagtttgggatgaactaaaatcgtcttgtaattttgtggaagctcgc
aaagctgtgaatagttttaacagtaatagccgctggaggaagcgaggaattgccatgatt
cccacaaaatttggcatatccttcactgcgaaattcatgaatcaggctggcgctcttgtg
caagtttacactgatggcactgtcctggtaacacatggtggggttgagatgggacagggt
ttgcacacaaagatagcccaagttgctgcttcatcattcaatatccctcttagctctgta
tttatatcagagacaagtaccgataaggtcccaaatgcatcaccaacagcagcctctgct
agttcagatctgtatggagctgcagttttggatgcttgtcagcaaatcaaggttcgaatg
gaacccattgctagcaaaggaacccacaactcgtttgcagagttggctcaagcatgctac
atggaacgtgtggatctatctgctcatgggttttatgctacacctaatattgggtttgac
tggacaattggcaagggaactccgttcaattatttcacatatggagctgcatttgcagaa
gttgagatcgacaccctaactggggatttttacacaaggacagctgatattgttatggat
cttggcttttcaattaatccagcaattgacatcggccagattgaaggagcttttgtccaa
ggattgggttgggcagccatggaagagctaaaatggggggatgataaccataagtggatt
cgacctggacacctcttcacctgtggtcctggttcttacaaaataccctctgtaaatgat
atacctctaaatttcaaggtttctctattaaagggggttccaaatccaaaggctattcat
tcttccaaagccgtgggagagccaccatttttcctcggctccgctgtcttatttgcgata
aaggatgcgatctttgcggcaagggctgaggaggggcacttggagtggttcccactcgac
aacccggcgacaccagaaagaataagaatggcgtgtgtggattccattacaaagaaattt
gccggcatagattaccgacccaagcttagtgtatag
DBGET
integrated database retrieval system
