KEGG   Sorghum bicolor (sorghum): 8057452
Entry
8057452           CDS       T01086                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8057452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbi03041]
    8057452
Spliceosome [BR:sbi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    8057452
 Complex B
    8057452
 Complex C
   U2 SnRNP specific factors
    8057452
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 8057452
NCBI-ProteinID: XP_002446590
UniProt: A0A921QQ88 C5Y9P9
LinkDB
Position
6:47245223..47254834
AA seq 504 aa
MASTVLEATRAAHEDLERLERLAVRELQREPANPRDRLFQSHRVRHMLDLVVSTSDKLVE
IYEDKDNARKDEINTHLTAPTQSGLFSKYYERLKEIREYHRRNLSARFVSTTDDFEELLK
VEPVIEFTGEETFGRYLDLHELYNEFINSKFGTPMEYSAYVGCFSQTDKISHSHKATRQY
REYLEHVLEYLTSFLYRTEPLQDIEKIFLKLESEFEERWANGEIPGWGNKGTEKESEIDL
DYYSTVEELVELGPEKLKQALAARGLKSGGTVQQRAERLFLLKHTPLEQLDRKHFAKVPR
TKDGSNTSSNDNNVKDDTKKEIALMEVKMRRLCELLDEAFVRTKENAEKKLTLTYEEMEA
EREEEEVQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYW
GRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIDEAKALWEKIQARQGVNKWRPDLEE
EYEDQEGNIYNKKTYTDLQRQGLI
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggcgtcgacggtgctggaggcgacgcgggcggcgcatgaggacctggagaggctggag
cggctcgcggtacgcgaactgcagcgggagcctgccaacccgcgcgaccgcctctttcag
tcccaccgcgtccgccacatgctcgacctcgtcgtctccacctccgacaagctcgtggaa
atctatgaagacaaggacaatgctaggaaggatgagatcaacactcatcttactgctccc
acgcaaagtggactgtttagcaagtactatgaaaggctcaaagagatccgtgaatatcat
cggcggaacctatctgcccgttttgtcagtacaactgatgactttgaagagcttctaaag
gtggaaccagttattgaattcactggcgaggaaacttttggccgttacctagacttgcat
gagctttataacgagttcataaattccaagtttggaacaccgatggaatactcggcttat
gttggctgtttctcccagacggacaagatctcacatagtcataaggctaccagacaatac
agagaatacttggaacacgttttggaatatctgacatcatttctgtatcgcacagagcca
ttgcaagacattgagaagatttttctaaagctggagagtgaatttgaggaacgatgggcc
aatggagaaatacctggatggggaaataaaggcacagaaaaggaatctgaaatagatctt
gattactacagcacagttgaagaacttgttgagcttggcccagaaaagttaaaacaggct
ttagctgctcgtggtttgaagagtggtggtactgttcaacagcgcgcggagcggcttttc
ttgctgaagcatacaccgttggaacaactggacaggaagcattttgccaaagttccacgt
actaaagatggctcaaacacatcttctaacgacaacaatgttaaggatgatacgaagaag
gaaattgcattgatggaagtaaagatgaggcgcctttgtgagctgctagatgaggccttt
gtaaggacaaaggaaaatgcggagaagaagcttacactaacgtatgaagagatggaagca
gaacgggaggaggaggaggtacaagctgacaccgagagtgatgatgaagaacaacaaatc
tacaatcctctcaagttgccaatgggttgggatggcaagcctatcccctattggctatac
aagctacatggccttgggcaggaattcaagtgtgagatatgtggaaaccatagctattgg
gggcgaagggcttatgagcgtcatttcaaggaatggcgtcatcagcatgggatgcgatgc
cttggcattcctaatactaagaatttcaatgaaatcacatccattgatgaggcgaaagca
ctctgggagaaaattcaagcacgacaaggagtgaacaagtggcggccagacctagaagaa
gagtacgaagatcaggaaggcaacatctacaacaagaagacctacactgacctgcagcgt
caaggcctgatctaa

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