Sorghum bicolor (sorghum): 8057544
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Entry
8057544 CDS
T01086
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
8057544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbi03032
]
8057544
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8057544
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
8057544
DNA replication proteins [BR:
sbi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
8057544
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
8057544
Bloom's syndrome complex (BTR)
8057544
FA (Fanconi anemia) pathway
8057544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
8057544
NCBI-ProteinID:
XP_021314744
LinkDB
All DBs
Position
4:complement(2841653..2851444)
Genome browser
AA seq
1195 aa
AA seq
DB search
MQANKSPRVNWPQHENAVQGFSSRDGFLSSSFLFSLPTQKPSPEAPESMLSLRSSACKIQ
GSERFHAPLIEKAWRSLCNTQAARKSYLRPGLSAKVKDCDRGHARTCGEGSYNTNKMATV
SGNRMPSVESTSQPTERISLQNNSSHQPVGISSSMRSYQSNHVAQEDTRATNQYNFARTD
AALHQSAPVADNMCTYDNYDAMDDDILASIDVDRIVMEHYQATPRGSSHNMSTPPGNKCS
FNGMDEANLPRELSELCSHQCKLAFCREAMTHLQEMKDELLAVANELLDDDGELNPQHSQ
ELHQRRLHLKKLVQLLEDHMTRSAQDEERQISHSMASTKATQQHLPPMTPGSTFITDSNR
FQSQVYIGNGPRDSDLCYSSAPYSCSDNLSTPLNSVWKSYTPKVIDINYTEGSGDRKWSS
TNFPWTKDLEAKNRNKFGNRSFRPNQREIINATMSGYDVFVLMPTGGGKSLTYQLPALIS
VGLTLVVCPLVSLIQDQIMHLSQANIPATYLSGNLDWSEQQEIMRDLKSCRYKLLYVTPE
KIARSGALSGLLRDLDSQGHLSRIVIDEAHCVSQWGHDFRPDYKELGVLKQNFPKTPVLA
LTATATARVKEDVVQALALENCIVFKQSFNRPNLRYYLRPKTKKCVEDIDMFIRENHYKE
CGIIYCLSRMDCEKVSEKLRECGHTVAHYHGSMDPVNRTRIQEDWSKDKINIICATIAFG
MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQPSSCLLYYQYSDYIRVRHMITQGVG
EQTGAPRDLSSHEQALKTHKDNLLRMVSYCENDVDCRRLLQLIHFGERFDPSLCAKTCDN
CLKESGWVEKDVTNIARQLVDLVTMTGHSNSSTHILEVYRGSVSQNVKKQRHDALPLHGA
GKHLAKGEAARIMRHLVTEEILIEDVKKSDMYGSISSVLKVNHLKASDLRSGKRSVILKF
PAPGKASKMGNLDTSLFPQINKTVQQQSEVDEKLASILYEALLTLRRQIMEECSEGCHAY
HIFKTDTLKEMSIRVPRTKEELLDINGIGKTKLKKYGDRVLATIEDFLSKHPNPRRNISG
SGGKEHSEAAKKRRGSTASSAVSCGDDDFEEPTGQSKKRAAKTRTVSDAASMVHGARCID
ADLDGPEVVDVDEHCSVPKPVASGRVLPKWAPAKAKSKGSSVPPSNLFHEFGYAK
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaataagtcgccaagggtcaactggccgcaacacgaaaacgctgttcagggc
ttctctagcagagatggctttctgagttcaagctttctcttctccttgccgacacagaag
cccagccctgaagcccctgagagcatgctttcgttaaggtcttctgcctgtaaaattcaa
ggctcagagcgttttcatgctccattgatcgagaaggcctggcgttccctatgcaacact
caggctgcccgcaagagctatttaagacctggtttatccgcaaaagtgaaagactgtgat
agaggtcatgctcgtacttgtggagaaggctcatacaacaccaacaaaatggctactgtg
tcaggaaacaggatgccctctgtggaaagcacaagccaacccactgaaagaatttctctg
cagaacaacagtagccatcaacctgttggtatcagctcctctatgagaagttaccagagc
aaccatgtggcgcaggaagatacgagagcaacaaatcaatacaactttgcaagaaccgat
gctgcattacaccagtctgctccggttgctgataacatgtgcacttatgataattatgat
gccatggatgatgatattctagcgagtattgatgtggaccgaatagttatggaacattat
caagcaacacccagaggatcatctcataacatgtcaactccaccaggaaacaagtgtagc
ttcaatggcatggatgaggctaatttaccacgagaactatctgaattatgtagccatcaa
tgcaagctagctttttgcagagaggcaatgactcatttgcaggagatgaaggatgagctg
cttgcagtagccaatgagcttcttgatgatgatggtgaactcaatcctcaacattcacaa
gagcttcatcaaagacgattacatcttaagaaactggttcagctactcgaggaccatatg
acaaggtcagcccaagatgaggagagacaaatatcacactctatggcatccacaaaagct
acacagcagcatctgccacctatgaccccaggaagcacttttataacggatagcaataga
ttccaatctcaggtttacattggaaatggacctagggatagtgatttatgctattcttct
gccccatattcctgttcagataatctaagcacaccattaaattctgtatggaaaagctat
accccaaaggttattgatattaactatactgaaggatctggtgataggaagtggagtagt
acaaattttccatggactaaggaccttgaggccaagaacagaaataagtttggaaaccgt
tctttccgccccaaccagcgagaaataataaatgccacaatgagtgggtatgatgttttt
gttttgatgccaactggtggtgggaaaagtttgacatatcagcttccagcacttattagt
gtgggcttaacgttagtagtttgccctcttgtctcactcatccaagaccagatcatgcac
ttgtcacaggcaaatattcctgcaacttatttgagtggcaacttggactggtctgaacaa
caagagataatgagagatttaaagtcatgccgctacaagttgctgtacgtcactccagag
aaaatagcgaggagtggtgctttatcgggactattgagggatttagattcacaagggcac
ctttctagaattgttattgatgaagctcattgtgtaagccagtggggtcatgacttccga
cctgattacaaggaattaggtgttctaaaacaaaatttccccaagacaccagtcctggcc
ttgactgcaacagcaactgctagggttaaggaagatgttgtgcaagctttagcccttgaa
aactgcattgttttcaaacaaagttttaatcgtccaaatctgaggtactacttaagaccc
aagacaaagaaatgcgttgaggacattgacatgtttatccgtgaaaatcattataaagaa
tgcggcattatatattgcctttcaagaatggattgtgaaaaagtgtcagaaaaactaagg
gaatgtgggcacacagtagcacactaccatggtagcatggatcctgtgaatagaacacgt
atacaggaggattggagcaaggataagatcaacataatctgtgctacaattgcatttggg
atgggtatcaataaacctgatgttcgctttgttattcatcattcactgcccaagtccatt
gaaggatatcatcaggagtgtggacgtgcgggtagagatgggcaaccttcatcttgtttg
ctatattaccagtattctgactatattcgggtccgacatatgattacgcaaggagttggg
gagcaaacaggagcaccacgtgatttatcttcacacgagcaagcactgaagacacataag
gacaatctcttgagaatggtcagttactgtgaaaatgatgtggactgccgacgtctactt
caactgatccactttggggagaggtttgacccttcgctttgtgcaaaaacctgtgataat
tgcttgaaagagtcaggatgggttgaaaaagatgttaccaacattgccaggcaattggtt
gacctagtcacaatgacagggcactcaaattcgtctactcacattcttgaagtttacaga
gggtctgtgagccaaaacgtcaagaagcagcgtcatgatgctttacctcttcatggagct
gggaaacatctagctaaaggtgaggcagcaaggataatgagacatttagtaactgaggaa
atacttattgaggatgtgaaaaagagcgacatgtacggatcaatatcatctgtcctcaag
gttaatcatttgaaagctagtgatcttcgctctggcaaacgcagcgtcatcctgaagttt
cctgctcctggcaaggcctccaagatggggaatcttgatacctcattatttccacaaatc
aataagactgttcagcagcaaagtgaagtcgatgagaagcttgcatcgatactctacgaa
gctttacttaccctcagacgacagataatggaggagtgtagtgaaggatgccatgcgtac
cacatattcaagactgacacgttgaaggagatgagcatccgagtaccaagaacaaaagaa
gagcttttggatataaacggcatcggcaagacaaagctcaagaagtacggggaccgtgtg
cttgcaaccatcgaggacttcctgagcaaacacccaaatccaaggagaaacatcagcggc
agtggcggcaaagagcactccgaggcggcaaagaagcgaaggggctccaccgcgagctct
gcggtgagctgcggtgacgatgactttgaggaacccacgggccagtccaagaagcgcgcg
gccaagacgcgaactgtctccgacgccgcgagcatggtccacggcgcccgctgcatcgat
gccgatctggatggacctgaggtggtggatgtggacgagcattgcagcgtcccgaagccc
gtggcgtctggcagagttctgcccaagtgggcacccgccaaagccaaatccaagggtagc
agcgttcctccctctaacttattccatgaatttggatacgccaagtag
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integrated database retrieval system
