Sorghum bicolor (sorghum): 8058380
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Entry
8058380 CDS
T01086
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8058380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8058380
03012 Translation factors [BR:
sbi03012
]
8058380
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
8058380
Translation factors [BR:
sbi03012
]
Eukaryotic type
Release factors
8058380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
8058380
NCBI-ProteinID:
XP_002463109
UniProt:
C5XD37
A0A921UUY4
LinkDB
All DBs
Position
2:complement(72084651..72088619)
Genome browser
AA seq
437 aa
AA seq
DB search
MSDSHETDRNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQVARVAKMLGDEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN
VSLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDINRYTLKNSSTGEITIKHLNKEQEADQSNFRD
PTTNTDLEVQEKMSLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDI
RSFDELSDDDDVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagccatgagacggacaggaacattgagatttggaagattaagaagctgatc
aaggcattggagtcagccaggggcaatggcacaagcatgatctctctaatcatgcctcca
cgcgatcaggttgctcgagtggctaagatgttaggtgatgaatatggaactgcttcaaac
atcaagagtagagttaatcgccagtctgtgctggctgccatcacctcagctcagcagagg
ttgaagctctacaacaaagtgcctcctaatggattggttctgtacactggaactattgtt
actgaagacggaaaggaaaagaaagttactattgattttgagcccttcaagcctatcaac
gtgtcgctctacctctgtgacaacaagttccacactgaggctctaaatgagctattggaa
tctgatgacaagtttggtttcattgttatggatggtaatggtactctttttggcacacta
agtggcaatacccgtgaagtgcttcacaaattcactgttgacctcccgaagaagcatggt
agaggaggacagtctgctctgcgttttgctcggcttcggatggagaaacgccataactat
gtccgcaaaacagctgaacttgctacccagtttttcatcaatccagctacaagtcagcct
aatgttgcagggttgattcttgctggttctgctgattttaagactgagctgagccaatct
gatatgttcgatcagcgactccaagccaagatactcaacgtggttgatgtttcttatggt
ggcgagaatggtttcaaccaagccattgagttgtctgctgaaattcttgcaaatgtgaag
ttcattcaagagaagaagttaattggcaagtattttgaagagatcagtcaggatactggg
aaatatgtctttggtgttgatgacacccttaaggctcttgaaatgggtgctgttgagacc
ctgatagtgtgggaaaatctggatatcaacagatatactctcaagaacagttctactggg
gagatcactataaaacatctgaacaaagagcaggaagctgatcagagcaatttccgtgac
ccaactaccaatactgatctcgaagttcaggaaaaaatgtctctcttggaatggtttgcc
aatgaatacaagaagtttggttgctcgctggagtttgtgaccaacaagtctcaggaggga
tcacagttttgtagaggatttggtggcattggtggcatgttgcgctaccagctggatatc
cgttcttttgatgagctctctgacgatgacgatgtgtatgaagactctgattag
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