Sorghum bicolor (sorghum): 8058852
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Entry
8058852 CDS
T01086
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
8058852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8058852
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
8058852
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
FAM104
Motif
Other DBs
NCBI-GeneID:
8058852
NCBI-ProteinID:
XP_002437061
UniProt:
C5Z3L8
A0A921Q2U0
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Position
10:44484307..44487838
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AA seq
380 aa
AA seq
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MAEALCDQLFSDVDGELMRQHTSDTDDLLGILEAWEDCVTGGGATTPRGADVLHQSASDA
AATPKAAAAKRRRQGCREEDGTAVPAPKRQRCSPVSSDAAAASEDGAANKTSHITVERNR
RKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLQSLEAKKQRKAYTEQVL
SPRPPACCSPRPPLSPRPPLPPLKSTPPISPRPAVPISPRTPPPAPSSPYKPRRQPISVP
LPPPGSSAYASPAMTPTREPAAASYLPSLDTVAADLCAYAATNKQLQPALPAAAGGVVVL
PDVKVEFSGANLVVKTVSHRAPGQTVKVIAALEGRSLEILDAKINTVNDTAVNSYTIKIG
IECELSAEELVQEIQQAFSS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcactgtgcgatcagctcttctccgacgtcgacggcgagcttatgcggcag
cacacttccgacaccgacgacctcttgggcatcctcgaggcgtgggaggactgcgtcact
ggcggtggtgcaactactccccgcggcgctgatgtcctccatcagagtgcatctgacgcc
gccgcaacgccaaaggcagcggcagctaaacgtcggcggcaagggtgccgggaagaggac
ggcacggcggtgccggcgccaaagaggcaaaggtgctcgccggtgtcctcggatgcagcg
gccgcgagtgaagatggtgcggcaaataagacctcgcacatcacagtggagcgtaaccgg
aggaagcagatgaacgagcacctcgccgtgctccgctcgctcatgccttgtttctacgtc
aaacgaggagaccaggcatccatcattggaggggtggtggactacatcaaggagctgcag
caagtgctgcagtcgctggaggccaagaagcagcgcaaggcttacaccgagcaggtgctc
agcccacggccaccggcgtgctgcagccctcgccctccgctcagcccccggccgcccctg
ccgccactcaagtccacgccgccaataagcccgcggcccgccgtgccgatcagccccagg
acgccgccgccggctcccagcagcccgtacaaaccccgcaggcagccgatatcggtgccc
ctaccgccaccgggctcgtcggcctacgcgtccccggcgatgacgccaacacgggagcca
gcggcagcatcctacctgccgtcgctggacaccgtcgctgccgacctctgcgcctacgcc
gccaccaacaagcagctgcagccggcgctgccagcagcggccggtggtgtcgtcgtcctc
ccggacgtgaaggtggagttctccggcgccaacctggtggtgaagacggtgtcgcaccgc
gcgcctgggcagaccgtgaaggtcatcgccgcgctggaggggcggtcactggagatcctc
gacgccaagatcaacacagtcaacgacactgcggtgaactcctacaccatcaagattgga
atagagtgcgagctcagcgctgaagagctggtgcaagagattcagcaagcgttctcgtcg
taa
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