Sorghum bicolor (sorghum): 8074643
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Entry
8074643 CDS
T01086
Name
(RefSeq) putative adagio-like protein 2
KO
K12115
clock-associated PAS protein ZTL
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
8074643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8074643
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
8074643
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_4
Kelch_3
Kelch_2
Kelch_5
Kelch_1
Kelch_6
PAS_9
F-box-like
PAS_3
PAS
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
8074643
NCBI-ProteinID:
XP_002451556
UniProt:
C5XUQ2
A0A921R3F2
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All DBs
Position
4:3463189..3467937
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AA seq
612 aa
AA seq
DB search
MEWDSDSDGGGDDEEEEEVRPGGGGGDAGPGFSLAIEGVLGACGMVVSDALEPDFPIIYV
NRGFEEATGYRAEEVLGRNCRFLQCRGPFAQRRHPLVDAAVVTGIRRCLEEGTEFQGDLL
NFRKDGSPYMARLQLTPIYGDDEMITHYMGIQFFNDSNVDLGPSPGSVTKELARSTWIAP
GNTDSPTSVGKGNLWEHSSLFLLSDEVICQKILSKLSPRDIASVNSVCKRFYHMTRNEDL
WRMVCQNAWGTEATRALETVAGSRSLAWGRLARELTTLEAVAWRKLTVGGAVEPSRCNFS
ACAVGNRVVLFGGEGVNMQPMNDTFVLDLSASKPEWRHINVSSAPPGRWGHTLSCLNGSR
LILFGGCGGQGLLNDVFILDLDAQHPTWREIPGLAPPVPRSWHSSCTVDGTKLVVSGGCA
DSGVLLSDTYLLDVTMEKPVWREIPASWSPPSRLGHSLSVYDGKKILMFGGLAKSGPLRL
RSSDVFTLDLSEDKPCWRCITGSRMPGAGNPAGVGPPPRLDHVAVSLPGGRVLIFGGSVA
GLHSASKLYLLDPTEEKPTWRLLNVPGHPPRFAWGHSTCVVGGTKAIVLGGQTGEEWMLT
EIYELSLASSLI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggacagcgattccgacggcggcggtgacgacgaggaggaagaagaggtccgc
cccgggggcgggggcggggacgcgggcccggggttctcgctggccatcgagggcgtgctg
ggcgcgtgcggcatggtggtctccgacgcgctcgagcccgacttccccatcatctacgtc
aaccgcgggttcgaggaggctaccggataccgcgccgaggaggtgctcgggaggaactgc
cggtttctacaatgcagaggaccatttgctcagaggagacatccccttgttgatgcagca
gttgttactgggattcggagatgtttagaggaagggactgagtttcagggtgacctgttg
aattttagaaaagatggttctccatacatggcaaggctgcaattaacacccatatacgga
gatgatgaaatgataacacactatatgggtatccagtttttcaatgattctaatgttgac
ttgggtccttcacctggctctgtaacaaaagaacttgcgagatccacatggattgcacct
ggcaacactgactcaccaacttcagtaggcaagggtaatttgtgggaacattctagtctc
tttctgctgagtgatgaggtaatttgccagaagatcttgtctaaattgtcacccagggat
atagcatcggtaaactctgtttgcaagcgattttatcacatgacaaggaatgaagacctt
tggaggatggtttgtcagaatgcatggggcactgaagctactcgggcccttgagaccgtg
gcaggatcaagaagtttggcatggggccggctagcacgagagttgaccacccttgaagct
gttgcctggaggaaattgacagtcggtggtgcagtggagccatctcgctgcaacttcagt
gcctgtgctgtagggaatcgtgttgtcctatttggtggagagggtgttaacatgcagcca
atgaatgatacatttgtgctggacttgagtgccagcaagccagaatggaggcacatcaat
gtgagctcagctcctcctggtcgctggggccataccctatcatgcctgaatggatcacgg
ctgattctgtttggtggctgtggggggcaggggctgcttaatgatgtcttcattttggat
cttgatgcgcagcatccaacttggcgtgagattcctggccttgcaccccctgtaccgcgg
tcatggcatagctcttgcactgtggatggaaccaagctggtggtttctggtggatgtgct
gactctggtgttcttctcagtgatacctacctcctagatgtgacgatggaaaaacctgtt
tggagggagatacctgcatcttggtctccaccttccaggctggggcactcactatccgtc
tacgatggcaagaaaatcctgatgtttggtggccttgctaaaagtggtcctctacggctt
cgatctagtgatgtgttcactctagatttaagtgaagacaagccttgctggaggtgcatc
actggcagcaggatgccaggagctggtaatcctgctggagttggcccacctcctcgcctt
gatcatgttgccgtgagccttcctggtgggagagttttgatatttggtgggtctgtggcg
ggtcttcactctgcttcaaaactttacctcctggatccaactgaagagaagccaacctgg
aggcttctgaatgttccagggcatcctccacggttcgcctggggccacagtacttgtgtt
gttggagggacaaaggcaatagttcttggaggacaaactggagaagagtggatgctaact
gaaatatatgagctttctctagcaagctcattaatctga
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