Sorghum bicolor (sorghum): 8076963
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Entry
8076963 CDS
T01086
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8076963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8076963
03036 Chromosome and associated proteins [BR:
sbi03036
]
8076963
Spliceosome [BR:
sbi03041
]
Complex B
Other components
Prp19-related factors
8076963
Complex C
8076963
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
8076963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_14
Suf
HAT
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_2
HAT_Syf1_M
U3_assoc_6
TPR_9
Mad3_BUB1_I
TPR_12
Motif
Other DBs
NCBI-GeneID:
8076963
NCBI-ProteinID:
XP_002441103
UniProt:
A0A921U4K9
C5YXW0
LinkDB
All DBs
Position
9:complement(49605321..49613273)
Genome browser
AA seq
720 aa
AA seq
DB search
MALTTRGGAAGGDPAKAPSASDPSLGFLTKRDTEVKLPRATRVKNKTPAPIQITAEQILR
EARERQEPEIRPPKQKITDPHELSEYRLRKRKEFEDVIRRVRWSVSAWVKYARWEEQQRD
FARARSVYERALDVAHRDHTLWLKYAEFEMRNRFVNHARNVWDRAVSLLPRVDQLWYKYI
HMEELLGAVANARQVFERWMSWRPDTAGWNSYIKFELRYGEVERARAIYERFVAEHPRPD
TFIRYAKFEMKRGEVERARRVYERAADLLADDEDAEVLFVAFAEFEERCREVERARAIYK
YALDRVPKGRAEELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDY
IRLEESVGNKDRIREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAQDIERTREV
YKECLRLIPHKKFTFAKMWLMAAQFEIRQLNLNAARKILGNAIGMAPKGKIFKKYIEIEL
YLGNFDRCRTLYEKYIEWSPANCYAWRKYAELEKNLSETDRARSIYELAIVQPALDTPEV
LWKEYLQFEIDENEFERTRQLYERLLDRTKHLKVWISYAEFEASAGLGGEDSESEEKKNE
VDYQEQQIERVQKCRAIFERAFDYFRTSAPELKEERAMLLEEWLNKEVSFGDLGDVSLVQ
KKAPRKVKRKRPIPTEDGSTIAYEEYIDYIFPDEVALAPNLKILEAAYKWKKQKTGDDDE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcactacacggggcggcgccgccggcggggatccggcgaaggcgccgtccgcc
tccgaccccagtcttggcttccttaccaagcgcgacaccgaggtcaagctgccccgcgcc
acgcgggtcaagaacaagacccccgcgcctatccagattacggccgagcagatcctccgg
gaggccagggagcggcaggagcctgagattcgcccgcccaagcagaagatcacagacccc
cacgagctctccgagtaccgcctccgcaagcggaaggagttcgaggacgtcatccgccgc
gtgcggtggagcgtctcggcgtgggtcaagtacgcgcggtgggaggagcagcagcgagac
ttcgcgcgcgcgcggtccgtctacgagcgcgcgctcgatgtcgcccaccgcgaccacacg
ctctggctcaagtatgccgaattcgagatgcggaaccggtttgtcaaccacgcccggaat
gtctgggaccgtgcggtgtcgctcctgccccgggtggatcagctctggtacaagtacatc
cacatggaggagctgcttggtgcagttgccaatgcgcgccaggtgtttgagcgctggatg
tcttggcgacccgacacagctggctggaattcttacatcaagtttgagctgcggtatgga
gaggtcgagcgtgccagggctatctatgagcggtttgtggctgagcacccacggccagat
accttcatccgctatgctaagtttgagatgaagcgcggtgaagtagagcgggcacggcgg
gtgtatgagcgtgcagcagacctgcttgcggatgatgaggatgcagaggtgttatttgtg
gcatttgcagagtttgaagagaggtgccgtgaggttgagcgtgcacgtgcaatatacaag
tatgctctggacagggtccctaagggtcgtgctgaggaactgtataggaagtttctggca
tttgagaagcaatttggtgaccgtgagggaattgaggatgccattgtgggcaagagaaga
tttcagtacgaggatgaggttaggaagaacccactaaactacgattcatggtttgattat
atcaggctggaggagagtgttgggaataaggacagaatcagggaggtgtacgagagggcc
attgccaatgtgccccccgcagaggagaagcgatattggcagaggtatatatacctctgg
attaattatgcactttatgaggagctagatgcacaagacatagaacggaccagggaggtt
tacaaggaatgcctgaggttgattcctcacaagaaattcacgtttgcaaagatgtggctc
atggcggcccagtttgagataaggcagttaaatctgaatgctgcaagaaaaattcttggg
aatgcaattggaatggccccaaagggcaagatattcaagaaatatattgaaatcgagctt
tatctgggcaactttgaccgctgtaggactctttatgagaaatatattgaatggtctcca
gcaaactgttatgcatggaggaagtatgccgaattggagaagaaccttagtgagactgat
cgtgctcgatcaatatatgaacttgctattgtgcagccagcccttgatacaccagaggtt
ctgtggaaggagtacttgcagtttgaaatcgatgaaaatgaatttgagaggacaaggcaa
ctatatgaaagactgcttgataggacaaagcatttgaaggtatggatcagttatgctgag
tttgaggcctctgctggcttgggcggtgaagacagtgaaagtgaggagaaaaagaatgaa
gttgattatcaagaacagcagatcgagcgggtccaaaaatgtagagctatctttgaaagg
gcattcgactacttcagaaccagtgccccagagttgaaggaggaaagagctatgcttctt
gaagaatggcttaataaggaagtgagctttggtgatctcggggatgtcagcttagtgcaa
aagaaggcgcccagaaaagtcaagcggaagagaccaatccctacagaagatgggtccact
atagcgtatgaggagtatatagattacattttccctgatgaagttgctctagcaccaaac
ctgaagatccttgaagctgcttacaaatggaagaagcagaaaactggtgatgatgatgag
tga
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