Sorghum bicolor (sorghum): 8081583
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Entry
8081583 CDS
T01086
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU70
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
8081583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8081583
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8081583
Spliceosome [BR:
sbi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8081583
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
8081583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
SAP_new25
HeH
Motif
Other DBs
NCBI-GeneID:
8081583
NCBI-ProteinID:
XP_002461302
UniProt:
C5X745
LinkDB
All DBs
Position
2:complement(433369..443555)
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AA seq
628 aa
AA seq
DB search
MDLDPEGIFRDDSDEDEDNVQEREANKDMVVYLVDASPKMFTPATTQDNEKQETYFHTIV
NCITESLKTQIIGRSYDEVAICFFNTKEKKNLQDSAGVYVYNVGDREQLDRPTAKLIKDF
SCIEDSFMSTIGSRFGITAGSRENTLYNALWVAQALLRKGSVKTVSKRILIFTNEDDPFG
TVTGAVKTDMIRTTIQRAKDAQDLGLSIELLPLSQPDEQFDMSLFYADLIGLDGDEITEY
LPSAGDKLEDMANQLRKRIMRKRRVKTLSFAITNDVCIEVNTYALVRPTTPGKITWLDSL
SNLPLKAERSFICNDTGALLQDPQTRFQMYNDTIVKFSVLELSEVKRVASHHLRLLGFKP
LDCLKDYHNLRPSAFIYPSDERIFGSTRVFVALHSSMLRLGRFALAFYGNPTRPQLVALV
AQEEVTSSGGQLEPPGMHMIYLPYSDDIRYPEEFHVTSDDAPRATNEQIKKALNLLKRID
LKKFSACQFANPALQRHYGILEALALGEDEMPDIKDDTLPDEEGLSRPGVVNAIEEFKTS
VYGENYDQEEAEAAAGKASRGDASKKRKQITDAAVQMSAAYDWAELADNGKLKEMTVVEL
KSYLTAHGLPVSGKKEVLVSRILTHLGM
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggacctagaccccgagggcatcttccgcgacgacagcgatgaagacgaagacaacgtc
caggagagggaggctaacaaggatatggttgtctaccttgtcgacgcctcgcccaaaatg
ttcacccctgctaccacccaggacaatgaaaagcaggagacatattttcataccattgtt
aactgcatcacagagtctctcaagacacaaattattggtagatcttatgatgaagtcgca
atatgtttctttaacactaaagagaagaagaatttacaggactcagctggtgtttatgtt
tataatgttggagacagagagcaacttgatagacccactgcaaaactcatcaaagatttt
tcttgcatagaagattcttttatgagcaccattggaagtcgatttggaataacagctgga
tctcgggagaataccctgtataatgctctttgggttgctcaggcgctgctgcgcaaggga
tctgtgaagaccgtcagtaaacgaattcttatattcaccaatgaagatgatccttttggt
actgttacaggagcagtgaaaactgatatgattaggacaacaattcaacgtgcaaaggat
gcacaagatcttggcctgtctattgaacttcttccacttagccagcctgatgagcagttc
gacatgtccctattttatgcagatttgattggcctggatggagatgagataaccgagtat
ttgccatctgctggtgataagctagaggatatggctaatcaactgagaaaacgaataatg
aggaagcgcagagttaaaactctttcatttgcaattaccaatgatgtgtgcatagaagtg
aatacatatgcgctggtccgtcctactactccagggaaaatcacatggcttgattcacta
agtaaccttccattaaaggctgagaggtctttcatatgcaatgatactggggctctactt
caggatccacagacacgtttccagatgtacaatgacacaattgtcaaattttctgtactt
gaactctctgaggttaaaagggttgcaagccatcatcttcgccttttaggtttcaagcca
ttggattgcttgaaagattaccataacttaagaccatcggcatttatttatccgagtgat
gagcgtatatttggaagcactcgtgtttttgttgctttacatagctcaatgttacgtctt
ggaaggtttgcacttgcattttatgggaatccaactcgaccacagctcgtagcccttgtt
gctcaagaagaggttacttcctctggtggccagttggaaccgcctggcatgcacatgatc
tatcttccatactccgatgatattagatatcctgaagaatttcatgtgacttctgatgat
gcaccgcgtgcaacaaatgaacaaatcaagaaagctttgaatcttttgaaacgtattgat
ctgaaaaagttctctgcatgccaatttgctaacccagctttgcaaagacactatgggatc
ttggaggctttagctttaggcgaagatgagatgcctgatataaaggatgataccctgcct
gacgaagaaggcttatctaggccaggggtagtcaatgctattgaggaattcaagacttca
gtctatggtgaaaattatgaccaagaggaggcagaagcagcagcagggaaagcttcccgt
ggtgatgcttcaaaaaagcggaagcaaatcactgatgcagctgtgcagatgagtgctgct
tatgattgggcagaacttgcagacaatggaaaactgaaggaaatgactgtggtagaattg
aaatcctacctgaccgcgcatggcctcccggtttctggtaagaaagaggtacttgtcagc
aggatcttgactcatctaggcatgtga
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