Sorghum bicolor (sorghum): 8085960
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Entry
8085960 CDS
T01086
Name
(RefSeq) protein transport protein sec23-1
KO
K14006
protein transport protein SEC23
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8085960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8085960
Membrane trafficking [BR:
sbi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
8085960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
zf-H2C2_2
VWA
Motif
Other DBs
NCBI-GeneID:
8085960
NCBI-ProteinID:
XP_002466477
UniProt:
C5X188
LinkDB
All DBs
Position
1:complement(7287753..7291550)
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AA seq
753 aa
AA seq
DB search
MDFAELEAVEGLRWPWHSWPPTAPAAASLVVPTAVLCSPLQHPTAPDLLPLLPYAPLRCA
TAGCGAALNPFSRVHHGSARWSCPFCGAAANPFPRLLAPDALPAELFPTHSSVEYALPPD
PAEAGGPGPPALVFVIDAATAAEELAVLKDEVRRVVQGLPEGIRVALVTFAASVWVHDLG
FEGCARVVVLNGERELESDKIQELLGVHRSPYKKLAMPRSTEAQRFLLPVSECEFNITSA
IEDLGSMSACPRGHRPLRATGAAISTAIALLEGCCSPSTGGRIMVFTSGPATVGPGCVVE
TDLGKAIRSHRDIFNSNAPLTDKARDFYKKVAKRLADHALVLDLFACSLDQVGAAELRNP
IEVSGGLMVHTESFESEQFKSCFRHMFKREGTNYLNMNFNATIEIVTSKEVKICGALGPC
ISLRRKNSSVSDKEIGEGGTNYWKTSSLSSKTSIAFFFRVDCSHKAEPPTVFFIQFMTRY
RHGDGSYRLRVTTVARRWAAPRSPEIAAGFDQEAAATVMARLAVYRAETYHVRDVIRWLD
KMLIRFTAKFGNYVPEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVFNSSPDETAFFRLML
NREGVVGSLIMIQPTLFQYSFDGPPIPVLLDVSSISPDVILLFDSYFYIVIHYGSKIAQW
RKLGYHKDPNHENLRKLLEAPEVDAEALLVDRFPVPKLIKCDQHGSQARFLLARLNPSVT
QKTQLSEGSEVIFTDDVSLQVFIEHLQELAVQS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgcggagctggaggccgtagagggcctccggtggccgtggcactcgtggccg
ccgactgcccccgcggccgcgtccctcgtcgtgcccaccgccgtgctctgctcgccgctg
cagcaccccacggcgcccgacctcctcccgctgctcccctacgcgccgctccgctgcgcc
accgcggggtgcggcgccgcgctcaaccctttctcgcgcgtgcaccacggctccgcgcgc
tggtcctgccccttctgcggcgccgccgccaacccgttcccgcgcctcctggcccccgac
gcgctccccgccgagctcttccccacccactccagcgtcgagtacgcgctgcccccggac
cccgccgaggctggggggccggggccacctgcgctagtgttcgtgatcgatgcggccacc
gcggccgaggagctggccgtgctgaaggacgaggtgcgcagggtcgtgcaggggctgccc
gaggggatcagggtggcgctcgtcactttcgctgcgtccgtgtgggtgcacgatcttgga
tttgagggttgcgctcgggtggttgtgctcaatggcgagcgtgagctcgagtctgacaag
atacaagaactacttggtgttcaccgttcaccgtacaagaagttggctatgccaaggtcc
actgaagcgcagcggtttttgctgcctgtttctgaatgtgaatttaacatcacatctgca
atagaggacctgggctccatgtctgcatgtccacgtgggcatcgccctttaagagcaact
ggcgcagcgatttccaccgctattgctcttctagagggttgctgctcacctagtaccggt
ggtcggattatggtctttacatctggtcctgcaacagttggtccagggtgtgtggtggaa
actgatcttgggaaagcaattcgttctcatcgtgacatattcaatagcaatgcaccactg
actgacaaagcacgtgatttctataagaaagtagcgaagaggttggcagaccatgcatta
gttcttgatctattcgcctgctctcttgatcaggttggggctgcagagctgaggaatcca
attgaagtgtcagggggtttaatggtgcatacagagtcatttgagtctgagcagttcaaa
agctgttttaggcatatgttcaagcgtgaaggcaccaattaccttaatatgaactttaat
gcgacgattgaaatagtgacatcaaaggaggtgaagatttgtggtgcccttggtccctgc
atttccctccgtaggaaaaatagctcagttagtgataaggaaattggtgaaggtgggaca
aattattggaaaactagttcactgagcagcaagaccagcattgccttctttttccgagtt
gattgcagtcataaagctgagcccccgactgtcttctttattcagttcatgacaagatac
cgacatggtgatggtagttatcgcctaagggtaacaaccgttgcaagaaggtgggctgct
cctcgatctcctgaaattgctgcagggtttgatcaggaagctgctgcaactgttatggcc
aggcttgctgtttacagggcagagacataccacgttagagatgttatacgatggcttgac
aagatgcttatccgctttactgctaagtttggaaactatgttcctgaagatccatctacg
tttcggctgtcaacaaacttctccttgtatccgcagttcatgtactacttgcggagatca
cagttcattgatgttttcaacagttctcccgatgaaactgctttcttcaggttgatgctg
aatagggagggagttgtggggtctctaatcatgatacagcctactctattccagtactca
ttcgatggaccacctattcctgtgctgttagatgtcagctccatctctcctgatgtcatt
ttactatttgattcatacttttatatcgtgattcactatggctcaaagattgctcaatgg
aggaagcttggctatcataaggacccaaaccacgaaaatttgcggaagctccttgaagca
ccagaagtagatgcagaggcactactggtagaccgtttccctgtaccaaaactcataaag
tgtgaccagcatggtagccaggccaggttcttgcttgctcggttgaatccatctgtgaca
cagaaaacacagctttcagagggatctgaagtcattttcactgacgatgttagtttgcaa
gtgtttattgaacacttgcaggagttggctgttcagagctag
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