KEGG   Sorghum bicolor (sorghum): 8155684
Entry
8155684           CDS       T01086                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03250  Viral life cycle - HIV-1
sbi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    8155684
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    8155684
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbi04131]
    8155684
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbi04147]
    8155684
Membrane trafficking [BR:sbi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    8155684
Exosome [BR:sbi04147]
 Exosomal proteins
  Proteins found in most exosomes
   8155684
SSDB
Motif
Pfam: UEV Vps23_core CATASP Pyridox_ox_2
Other DBs
NCBI-GeneID: 8155684
NCBI-ProteinID: XP_002489278
UniProt: C6JRL9
LinkDB
Position
8:complement(19551454..19552851)
AA seq 350 aa
MATTTAAATGTVVLVDAALAPYEYPDLRWLVRKHVLAVLQEFPTLSPSVDTYTSDSGAST
VLLNARGLLTVSSALPPVLLTLWLPREYPYLPPLAYVFPAAAPSSAAPLSLARDHPFVDH
RTGRVRRTVPYLEDWAVPRSSLAGLVRSLVAALRMCHPLTPRFGSAVVHATTRATPVEEE
QERMRTALLDELVSRLGRDTAAFRGHVDEDIHAMSSIQGSLRARGDAMDRAVRDLEDERL
RLERAVTASLSHRGKLLAWLHKTSSRAPEHDARAPPPLAPHAAAGDAPRWLESKASELAV
DDTVDALGHALEDGDLISFQEYIKRVKVLAREQFFHCHAAGTSMMSKHTK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggcgacgacgacggcagcagccaccggcacggtggtgctggtagacgcggcgctggct
ccgtacgagtaccctgatctccggtggctagtccggaagcacgtcctcgccgtcctccag
gagttccccaccctgtcgccgtccgtcgacacctacaccagcgacagcggcgcgtccacc
gtgctgctcaacgcgcggggcctcctcaccgtctcctccgccctgccgccggtgctcctc
acgctatggcttccccgggagtacccgtacctgccgccgctcgcctacgtcttccccgcc
gcggcgccgtcgtcggcggctccgctctcgctcgcccgcgaccaccccttcgtcgaccac
cgcaccgggcgcgtccgccgcacggtgccctacctcgaggactgggccgtgccgcgctcc
agcctcgctggcctcgtgcggagccttgttgcggccttgaggatgtgccacccgctgaca
ccccgcttcggctccgccgtcgtccacgccacgaccagagcgacgccggtggaggaggag
caggagcgcatgcgcacggcgctgctcgacgagcttgtgtcgaggctgggcagggacacg
gccgccttccgcggccacgtggacgaggacatacacgccatgtcctccatccaaggcagc
ctccgagcgcggggcgacgccatggaccgcgccgtccgcgacctcgaagacgagaggttg
cggctggagcgcgccgtgacggccagccttagccaccgcggcaagctgctggcctggctg
cacaaaacaagcagccgcgcgcccgagcacgacgcgagagcgccaccgcctctggcaccg
cacgcggcggcgggcgacgcgccgcggtggctcgagagcaaggcgtcggagctcgccgtg
gacgacaccgtggacgcccttggccacgccctggaggacggcgacctcatcagcttccag
gagtacatcaagcgtgtcaaggtgcttgctcgggagcaatttttccattgccatgcagca
ggcacctcgatgatgagcaagcacaccaaataa

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