Syngnathoides biaculeatus (alligator pipefish): 133501454
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Entry
133501454 CDS
T09681
Symbol
phf1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133501454 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133501454 (phf1)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133501454 (phf1)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
133501454 (phf1)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
133501454 (phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
133501454
NCBI-ProteinID:
XP_061677216
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All DBs
Position
5:881635..898107
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AA seq
536 aa
AA seq
DB search
MERRAALPGQRQEGKPPPPPPHPRGLFVCLSPREGRRPLSTAVRPQVDGVKRCCLVRFED
NSEFWVLRKDIHSFAAGVEEVCCICDAPPLKEPLVNCLKCRHGYHAECHTPSIEPEADSD
SWICRQCVFAVATKRGGAIKRGRFARLMHFMKLRLPYQLTSLDWDAQHLSNQQQCYCYCA
GPGEWNLKMLQCGSCGQWFHEACTQCLSKPLLYGDRFYQFQCSVCNKGPETVKRLPMTWV
DLAHLVLYHLSLCCKRKYFDFDHEILSFTNENWDSLLLGALSDTPRQERCHNLLNALNAH
KERFVSGKEIKKKKCLFGLQVRAPPPLTSDSLPLITEPPVNISHRRSPLSPPCQRRSSGP
EARKSKRRITETQACPPPVLSNPMELLPCCHGYVGGDGLYTPGRSEEELHLSSPPKRMYA
LYHTACNRNAALSRGLQHCNSMDDGCRLPPPCFPYPLDSSDHHQPGQKQPEPILLRDLPP
LPQADAVGGGVAREGLEDGTLARSWGGGEAVRILARRVMPDGKVQYLVEWDNVGLY
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggagcgacgggctgctctacctgggcaacgtcaagagggtaagccccccccccccccc
ccccacccgcgggggctttttgtttgtttgtcgccgcgcgaaggccgacggccgctttca
accgctgtccgcccgcaggtcgacggcgtcaagcgatgctgcctcgtgagattcgaggac
aactccgagttttgggtcctgaggaaagacatccactccttcgcagccggcgtggaggaa
gtttgctgtatctgcgacgctccgcccctcaaagagcccctcgtaaattgtctgaaatgt
cgccacggttatcacgccgagtgccacacgcccagcatcgagccggaagctgacagcgac
tcgtggatctgccgccagtgcgtctttgccgtagcgaccaagcgaggtggcgccatcaag
cgtgggcgcttcgcccgcctcatgcacttcatgaagctgcggctgccctatcagctgacg
tctttggactgggacgcgcagcatctgtccaatcagcagcagtgttactgctactgcgcc
ggacccggagagtggaacctgaagatgcttcagtgcgggagctgcggccagtggttccac
gaggcctgcactcagtgtctgagcaagccgctgctctacggggacaggttttatcagttc
cagtgctccgtgtgtaacaaaggaccagagactgtcaaaagactccccatgacctgggtg
gacttggcccacttggtgctctaccacctgtcgctgtgctgcaagaggaagtactttgat
ttcgaccacgaaatcttgtccttcaccaacgagaactgggactcgttgcttctgggcgcg
ctctccgacacgccgaggcaagaacgatgtcacaacctcctcaacgcgctcaacgcccac
aaggagcggttcgtctccgggaaagaaatcaagaagaagaaatgtcttttcgggctgcag
gttcgagccccgccgccgctgacgtccgattcgttgcccctcatcaccgagccgcctgtc
aacatctcccaccgcagaagcccgctgtcgccgccctgccagaggaggtcgtccgggccc
gaggcccgcaagtcaaagcggcgcatcaccgagacgcaggcctgtccgcccccggttttg
tccaaccctatggagctgctgccttgttgccacggctacgtgggaggggacggcctgtac
acccccgggaggtccgaggaggaactgcacctgagttctcctccgaaacggatgtacgcg
ctgtaccacacggcgtgcaacagaaacgcggcgctctccagaggtctccaacactgtaac
agcatggacgacggctgcagactccccccgccctgcttcccgtaccccctggactccagc
gaccaccaccagccgggacagaagcagccggaacccatcctgctacgcgatctgccgcct
ctcccccaggcggatgccgtcgggggcggcgtggcccgggaggggctggaagacgggacg
cttgccaggagctggggcgggggcgaggcggtgagaatcctggccaggcgggtcatgccg
gacgggaaggtgcaataccttgtggagtgggacaacgtgggcttgtactga
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