Syngnathoides biaculeatus (alligator pipefish): 133502539
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Entry
133502539 CDS
T09681
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
133502539
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133502539
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133502539
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
133502539
NCBI-ProteinID:
XP_061679422
LinkDB
All DBs
Position
6:complement(18811550..18840684)
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AA seq
1279 aa
AA seq
DB search
MFNWVVKVVPHPPGSPHTDADINNPPEVKQERPKNKDAKTPPPKSTCDASEDSQCQAGVL
GWLSNGFASALPQPAGSPHLEDKSAGDGERSGVIGWVTQSLTKVLPQPDDKYREVDDGNQ
DEHTEVYEVETMPDYDPLPHIPVVEMLSEDEGEEVEDSQYMFPPNVVTWLKQKIPQPVLL
PAGSVPIEPKPQKTPRSSLDKILSPPPESLSGIVLDTDSRASAMVGWFVSGLGLKIPQPV
LPQNDIEATAEVLKKASAQLNPDMVLEDVDSDNEGQDASTHLHRCAGTNEVLQASHPAIA
QILQEDAETQTGRWTPFIESIKREAEDVALATMEERLLQERTEMALMAAEVARQTAEMAI
RQLASEAQSIKLSLGSQELLEEPEAELQVLHDDREGNQQVMAYEELPAVEEQEDSQAEEQ
TIIEEDPEEEAEPRGISPSSSPRPEPAKASEPECVQQVVVQNREEEVSQVELVTQQPKKA
EKYVPETKTGEKEDATEDECGDTSRLSLRPAVNVEDVDSHSERAGEGKLEELLTPRDPKL
KTLTVPVTPTGGRQSKGDKDYNSRRRQSQSEDDDEEPSIPVRAWASQSSIHSTDDLLRER
PSSSASQTSTAVNERLQELVRMFKERTEKAKEKLIDPDSSDEDSIIPSPPKAAPLQPAPA
IQTVDKEDDEELPDLSKARAKNEAEEEKFDRQVKSPRWARGYVRYRFPTSIDPFTNLMYV
LWMFLVCLAWNWNAWFIPVRWAFPYQTPANIYYWLLADYLCDLIYILDITVFQPRLQFVR
GGDIVCDTKEMRKNYMKAKRFKFDVASLVPLELFYFKTGINPLLRLPRLLKINSFFEFNE
RLEAILTKAYVYRVIRTTTYLLYCLHCNACLYYWGSAYKGLGSTKWVYDGKGNSYIRCYY
FAVKTLITIGGLPDPTTLFEIVFQLINYFVGVFAFSIMIGQMRDVVGAATASQTYYRTCM
DNTIKYMSSYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLTQLPDKMRLDIAIDVNYSIV
SKVPLFEGCDQQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKT
VFVTLGAGSVFGEISLLAVGGGNRRTANVIAHGFANLFILDKKDLNEILVHYPESKKLLR
KKARRMLTKGKKPEPKEETKEPAQVQVSPVRPETPKLLRAALEMTEKSTGLKGAMAQVKE
RTNKSNVSLQASISSLPSLVSTRSASPASSTTFLSTFACYNDNSDLSLSLMEDMLPMDQR
QEAMGEEEEEEEEEEKEGG
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactgggtggtgaaagtggtccctcacccccctggatcgcctcacacagatgca
gatataaataatcctcctgaggttaaacaggagcggcccaaaaataaagatgccaagact
cctccacctaagagcacatgtgatgcttcggaagacagccagtgccaggcaggggtgttg
ggttggctgtccaatggctttgccagcgccttgcctcagcccgctggctcccctcacctg
gaagacaagtctgccggggatggagaaagatcgggagtgataggctgggtcactcagagt
ctgaccaaagtgctgccgcagcccgacgacaagtacagagaagttgacgatggcaaccag
gacgagcacacggaggtgtacgaagtggaaacaatgccagattatgaccccctcccacac
atccccgtggtggagatgctgtcggaagatgagggagaggaggtggaggacagtcagtac
atgttccccccaaacgtcgtgacgtggctgaagcagaagatccctcagccggttctgctt
cctgctggttccgtgcccattgagcccaaaccccaaaagactccccgctcctctttggac
aaaattctttctccaccacctgaatctctcagtggaatcgtactggacactgatagcagg
gcctcagcgatggtcggctggttcgtgtcagggctcggcttaaagatccctcagcctgtc
cttcctcaaaatgacattgaggccacagcagaagttctcaagaaagcctcagcccaactc
aatcctgacatggtgctagaagacgtggattcagacaacgaaggacaagacgcttccacg
cacctccacaggtgtgctgggacaaatgaagtactgcaagcatcccatccagccattgct
caaattcttcaggaggacgccgagacccaaacaggccgctggacacctttcattgaaagc
atcaagcgggaggccgaggacgtggctttagccaccatggaggagcgattgctccaggag
cgcacggaaatggccctgatggctgcagaagtggccagacagacggccgagatggccata
cgacagctggccagcgaggctcagtccatcaaactctcactggggagccaagagctgttg
gaagagcctgaggctgaactgcaggttttacatgatgacagagaaggaaatcaacaagtc
atggcatatgaggagcttcccgctgttgaagagcaggaggatagccaagctgaggagcaa
actataattgaagaagatccagaagaagaggccgagccacgagggatatccccctcttca
tctccaagacccgaaccagcgaaggcttctgagccggagtgtgtccaacaagtagtggtc
caaaaccgagaggaggaggtttcacaagttgaacttgtgacccaacagccaaagaaagct
gagaaatacgtgcctgaaaccaagacaggtgaaaaggaggatgccactgaagacgagtgt
ggggatacttctcgactcagcctccgtccagctgtcaacgttgaggacgtcgactcacat
agcgagcgagctggggagggcaaactggaagagctcctcacccctcgggaccccaaatta
aaaactctgactgtccctgtgaccccaacaggaggccgacaaagcaaaggagataaagat
tataatagtcgacggcggcaatctcaaagtgaagatgatgatgaggaaccaagtatccct
gtcagagcctgggccagccagtccagcattcacagcaccgatgacctcttacgagaacgt
ccgtcatcatctgccagtcagaccagcacagcggtcaatgagcgtcttcaggagctggtc
cgcatgtttaaagaaaggacggagaaagctaaagagaaactcatagatcctgacagttct
gatgaggacagcatcatcccctcacctccgaaggccgcaccgctgcagcctgctcctgct
attcagactgtggacaaggaagatgatgaggagctccctgatctttcaaaggcaagagcc
aagaatgaggcagaggaggagaagttcgaccgccaggtgaagtcccctcgatgggcacga
ggctatgtgcgctaccgcttccccaccagcattgaccctttcaccaatttgatgtacgtg
ctctggatgttcttggtgtgtttggcatggaactggaatgcgtggttcatcccagtgcga
tgggccttcccctaccaaacaccagccaatatttactactggctgctggccgactacctt
tgtgacctcatttacatcctggacatcacggtcttccaaccacgcctgcagtttgtccgt
ggaggggacattgtttgtgacacaaaagaaatgagaaagaattacatgaaagccaaacgt
ttcaagttcgatgtggccagtcttgttccactggagctcttttatttcaaaactggcatc
aatcctcttctacgcctgcctcggttactcaagatcaactcattctttgagttcaatgag
cgcttagaggccatcttgaccaaagcctatgtctacagggtgatccggaccacaacctat
ctcctatactgtcttcactgcaacgcctgcctgtactactggggctctgcctacaaaggg
ctgggctccaccaagtgggtgtacgacggcaaaggcaacagttacattcgatgttactac
tttgcggtaaagaccctcatcacaatcggggggttgccagaccccaccactctgtttgag
atcgtcttccagctcatcaactactttgtgggagtctttgcattttctatcatgattggg
cagatgcgtgatgtagttggtgcggccacagctagtcaaacatactaccgcacctgtatg
gacaacaccattaaatacatgtcctcatatcgtatcccgaaagatgtccagaatagagtc
aaaacctggtacaactacacttggcaatcgcaaggcatgctggatgaacaggaactgctg
actcagttaccagataagatgcgtctggacattgcgatagatgtcaactattccattgtc
agcaaggtccctctctttgagggctgtgatcaacagatgatctttgacatgttaaagagc
ctgcgctccgttgtctacctgccaggggattacgtctgcaaaaagggtgaggttggtcgg
gagatgtacatcataaaggcaggggaggtgcaggtggttggaggaccggatgggaaaacg
gtcttcgtcactctcggcgccggctcggtctttggcgagattagtctgctggcagtgggc
gggggcaacaggcgcactgcaaatgtgatcgctcacggctttgccaatctctttatcctg
gacaagaaagacctgaatgagattctggtccattatcctgaatccaagaaactgctgcgc
aagaaagccaggaggatgctcacgaaagggaagaaacctgaacccaaagaagaaaccaag
gagcctgcccaggtccaggtcagccctgtcaggcccgagacccccaaactgctgagagca
gccctggagatgactgagaaatccacaggactcaaaggggccatggctcaagtcaaagag
aggaccaacaagtctaacgtctcgctccaggcatccatctcatctctgccatccctcgtc
tccacgcgctcagcctctcccgccagctccaccacgtttctctccaccttcgcctgctac
aacgacaactccgacttgtcgctttccctcatggaggacatgctgccaatggatcaaagg
caagaggccatgggtgaagaggaggaggaggaggaggaggaggagaaggaaggtgggtag
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